(5 nodes) Photosynthetic electron transport in photosystem I network (Oryza rufipogon)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NKW0	Uncharacterized protein. (170 aa)
	A0A0E0NPX2	Uncharacterized protein. (359 aa)
	A0A0E0PL34	Uncharacterized protein. (158 aa)
	A0A0E0Q8E7	2Fe-2S ferredoxin-type domain-containing protein. (210 aa)
	A0A0E0QGN7	Uncharacterized protein. (509 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0NKW0	A0A0E0NPX2	Uncharacterized protein.	Uncharacterized protein.	0.984
A0A0E0NKW0	A0A0E0PL34	Uncharacterized protein.	Uncharacterized protein.	0.968
A0A0E0NKW0	A0A0E0Q8E7	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.970
A0A0E0NKW0	A0A0E0QGN7	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0E0NPX2	A0A0E0NKW0	Uncharacterized protein.	Uncharacterized protein.	0.984
A0A0E0NPX2	A0A0E0PL34	Uncharacterized protein.	Uncharacterized protein.	0.961
A0A0E0NPX2	A0A0E0Q8E7	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.991
A0A0E0NPX2	A0A0E0QGN7	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A0E0PL34	A0A0E0NKW0	Uncharacterized protein.	Uncharacterized protein.	0.968
A0A0E0PL34	A0A0E0NPX2	Uncharacterized protein.	Uncharacterized protein.	0.961
A0A0E0PL34	A0A0E0Q8E7	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.959
A0A0E0PL34	A0A0E0QGN7	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A0E0Q8E7	A0A0E0NKW0	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.970
A0A0E0Q8E7	A0A0E0NPX2	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.991
A0A0E0Q8E7	A0A0E0PL34	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.959
A0A0E0Q8E7	A0A0E0QGN7	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.981
A0A0E0QGN7	A0A0E0NKW0	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0E0QGN7	A0A0E0NPX2	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A0E0QGN7	A0A0E0PL34	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A0E0QGN7	A0A0E0Q8E7	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.981