(18 nodes) Cadmium ion transport network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NY43	Uncharacterized protein. (529 aa)
	A0A0E0MW89	Uncharacterized protein. (120 aa)
	A0A0E0MWX3	Uncharacterized protein. (520 aa)
	A0A0E0N233	Uncharacterized protein. (82 aa)
	A0A0E0N5K8	Uncharacterized protein. (154 aa)
	A0A0E0NRB1	Uncharacterized protein. (520 aa)
	A0A0E0NY38	Uncharacterized protein. (120 aa)
	A0A0E0NZ94	Uncharacterized protein. (374 aa)
	A0A0E0P015	Uncharacterized protein. (1285 aa)
	A0A0E0Q1K5	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family. (716 aa)
	A0A0E0Q1X4	Uncharacterized protein. (1032 aa)
	A0A0E0Q282	HMA domain-containing protein. (1067 aa)
	A0A0E0Q464	Uncharacterized protein. (1281 aa)
	A0A0E0Q5W9	HMA domain-containing protein. (935 aa)
	A0A0E0Q6B5	Uncharacterized protein. (518 aa)
	A0A0E0Q6C1	Uncharacterized protein. (518 aa)
	A0A0E0QAN4	FRIGIDA-like protein; Belongs to the Frigida family. (649 aa)
	A0A0E0RJ89	Uncharacterized protein. (541 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MW89	A0A0E0NRB1	Uncharacterized protein.	Uncharacterized protein.	0.477
A0A0E0MW89	A0A0E0NY38	Uncharacterized protein.	Uncharacterized protein.	0.429
A0A0E0MW89	A0A0E0NY43	Uncharacterized protein.	Uncharacterized protein.	0.456
A0A0E0MW89	A0A0E0NZ94	Uncharacterized protein.	Uncharacterized protein.	0.455
A0A0E0MW89	A0A0E0Q6B5	Uncharacterized protein.	Uncharacterized protein.	0.468
A0A0E0MW89	A0A0E0Q6C1	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A0E0MW89	A0A0E0RJ89	Uncharacterized protein.	Uncharacterized protein.	0.429
A0A0E0MWX3	A0A0E0P015	Uncharacterized protein.	Uncharacterized protein.	0.534
A0A0E0NRB1	A0A0E0MW89	Uncharacterized protein.	Uncharacterized protein.	0.477
A0A0E0NRB1	A0A0E0Q282	Uncharacterized protein.	HMA domain-containing protein.	0.523
A0A0E0NRB1	A0A0E0Q5W9	Uncharacterized protein.	HMA domain-containing protein.	0.477
A0A0E0NY38	A0A0E0MW89	Uncharacterized protein.	Uncharacterized protein.	0.429
A0A0E0NY38	A0A0E0Q282	Uncharacterized protein.	HMA domain-containing protein.	0.477
A0A0E0NY38	A0A0E0Q5W9	Uncharacterized protein.	HMA domain-containing protein.	0.429
A0A0E0NY43	A0A0E0MW89	Uncharacterized protein.	Uncharacterized protein.	0.456
A0A0E0NY43	A0A0E0Q282	Uncharacterized protein.	HMA domain-containing protein.	0.504
A0A0E0NY43	A0A0E0Q5W9	Uncharacterized protein.	HMA domain-containing protein.	0.456
A0A0E0NZ94	A0A0E0MW89	Uncharacterized protein.	Uncharacterized protein.	0.455
A0A0E0NZ94	A0A0E0Q282	Uncharacterized protein.	HMA domain-containing protein.	0.497
A0A0E0NZ94	A0A0E0Q5W9	Uncharacterized protein.	HMA domain-containing protein.	0.455