(41 nodes) Protein domain specific binding network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NUW7	Uncharacterized protein. (128 aa)
	A0A0E0N7D2	MSP domain-containing protein. (420 aa)
	A0A0E0NGY7	Uncharacterized protein. (119 aa)
	A0A0E0NIK3	MSP domain-containing protein. (268 aa)
	A0A0E0NIT4	MSP domain-containing protein. (237 aa)
	A0A0E0NN94	Lactamase_B domain-containing protein. (353 aa)
	A0A0E0NN95	Lactamase_B domain-containing protein. (288 aa)
	A0A0E0NP96	Uncharacterized protein. (388 aa)
	A0A0E0NTD2	Uncharacterized protein; Belongs to the ATPase B chain family. (211 aa)
	A0A0E0MRE2	Uncharacterized protein. (511 aa)
	A0A0E0MZF1	Uncharacterized protein. (306 aa)
	A0A0E0N2R8	Uncharacterized protein. (255 aa)
	A0A0E0N5L5	Uncharacterized protein. (268 aa)
	A0A0E0NZG4	VQ domain-containing protein. (143 aa)
	A0A0E0NZJ5	Uncharacterized protein. (518 aa)
	A0A0E0P210	Uncharacterized protein. (236 aa)
	A0A0E0PCF4	MSP domain-containing protein. (244 aa)
	A0A0E0PG55	Uncharacterized protein. (248 aa)
	A0A0E0PGK6	Uncharacterized protein. (146 aa)
	A0A0E0PI93	Uncharacterized protein. (125 aa)
	A0A0E0PLM9	Uncharacterized protein. (570 aa)
	A0A0E0PRU1	Uncharacterized protein. (353 aa)
	A0A0E0Q0Q1	Uncharacterized protein. (205 aa)
	A0A0E0Q7E9	Uncharacterized protein. (108 aa)
	A0A0E0Q9U7	MSP domain-containing protein. (284 aa)
	A0A0E0QA98	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (263 aa)
	A0A0E0QCM8	Uncharacterized protein. (117 aa)
	A0A0E0QE69	MSP domain-containing protein. (233 aa)
	A0A0E0QEH5	MSP domain-containing protein. (237 aa)
	A0A0E0QGI5	Uncharacterized protein. (148 aa)
	A0A0E0QJF7	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (244 aa)
	A0A0E0QME4	Uncharacterized protein. (203 aa)
	A0A0E0R161	MSP domain-containing protein. (321 aa)
	A0A0E0R257	MSP domain-containing protein. (300 aa)
	A0A0E0R2A3	AAI domain-containing protein. (133 aa)
	A0A0E0R4D4	Uncharacterized protein. (1206 aa)
	A0A0E0R6A0	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (283 aa)
	A0A0E0REN1	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (467 aa)
	A0A0E0REQ6	Uncharacterized protein. (207 aa)
	A0A0E0RGJ1	PsaL domain-containing protein. (201 aa)
	A0A0E0RKG1	VQ domain-containing protein. (111 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MRE2	A0A0E0NP96	Uncharacterized protein.	Uncharacterized protein.	0.898
A0A0E0MRE2	A0A0E0R4D4	Uncharacterized protein.	Uncharacterized protein.	0.757
A0A0E0N5L5	A0A0E0P210	Uncharacterized protein.	Uncharacterized protein.	0.490
A0A0E0N5L5	A0A0E0PG55	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A0E0N5L5	A0A0E0QA98	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.433
A0A0E0N5L5	A0A0E0QJF7	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.400
A0A0E0N5L5	A0A0E0R6A0	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.721
A0A0E0N5L5	A0A0E0REQ6	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A0E0N5L5	A0A0E0RGJ1	Uncharacterized protein.	PsaL domain-containing protein.	0.491
A0A0E0NGY7	A0A0E0NUW7	Uncharacterized protein.	Uncharacterized protein.	0.914
A0A0E0NGY7	A0A0E0Q7E9	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A0E0NGY7	A0A0E0QA98	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.777
A0A0E0NGY7	A0A0E0QCM8	Uncharacterized protein.	Uncharacterized protein.	0.953
A0A0E0NGY7	A0A0E0QJF7	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.809
A0A0E0NGY7	A0A0E0R6A0	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.930
A0A0E0NP96	A0A0E0MRE2	Uncharacterized protein.	Uncharacterized protein.	0.898
A0A0E0NP96	A0A0E0QA98	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.449
A0A0E0NP96	A0A0E0QCM8	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A0E0NP96	A0A0E0QJF7	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.444
A0A0E0NP96	A0A0E0R4D4	Uncharacterized protein.	Uncharacterized protein.	0.975