(5 nodes) Fanconi anaemia nuclear complex network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0PZF0	FA_FANCE domain-containing protein. (484 aa)
	A0A0E0NMQ7	Uncharacterized protein. (855 aa)
	A0A0E0P0Q6	Uncharacterized protein. (292 aa)
	A0A0E0P8I0	Uncharacterized protein. (241 aa)
	A0A0E0PAM4	Uncharacterized protein. (78 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0NMQ7	A0A0E0P0Q6	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A0E0NMQ7	A0A0E0PZF0	Uncharacterized protein.	FA_FANCE domain-containing protein.	0.599
A0A0E0P0Q6	A0A0E0NMQ7	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A0E0P0Q6	A0A0E0P8I0	Uncharacterized protein.	Uncharacterized protein.	0.902
A0A0E0P0Q6	A0A0E0PZF0	Uncharacterized protein.	FA_FANCE domain-containing protein.	0.662
A0A0E0P8I0	A0A0E0P0Q6	Uncharacterized protein.	Uncharacterized protein.	0.902
A0A0E0P8I0	A0A0E0PAM4	Uncharacterized protein.	Uncharacterized protein.	0.493
A0A0E0PAM4	A0A0E0P8I0	Uncharacterized protein.	Uncharacterized protein.	0.493
A0A0E0PZF0	A0A0E0NMQ7	FA_FANCE domain-containing protein.	Uncharacterized protein.	0.599
A0A0E0PZF0	A0A0E0P0Q6	FA_FANCE domain-containing protein.	Uncharacterized protein.	0.662