8 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0Q452	Uncharacterized protein. (1489 aa)
	A0A0E0MYQ9	Helicase ATP-binding domain-containing protein. (787 aa)
	A0A0E0NUU9	Uncharacterized protein. (1324 aa)
	A0A0E0P5K0	CDT1 domain-containing protein. (586 aa)
	A0A0E0PHW3	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (500 aa)
	A0A0E0PKL3	Uncharacterized protein. (248 aa)
	A0A0E0QK27	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (492 aa)
	A0A0E0R0Q5	CDT1 domain-containing protein. (573 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MYQ9	A0A0E0NUU9	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.526
A0A0E0MYQ9	A0A0E0PHW3	Helicase ATP-binding domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.627
A0A0E0MYQ9	A0A0E0PKL3	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.526
A0A0E0MYQ9	A0A0E0Q452	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.683
A0A0E0MYQ9	A0A0E0QK27	Helicase ATP-binding domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.627
A0A0E0NUU9	A0A0E0MYQ9	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.526
A0A0E0NUU9	A0A0E0Q452	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A0E0P5K0	A0A0E0PHW3	CDT1 domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.556
A0A0E0P5K0	A0A0E0QK27	CDT1 domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.556
A0A0E0PHW3	A0A0E0MYQ9	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	Helicase ATP-binding domain-containing protein.	0.627
A0A0E0PHW3	A0A0E0P5K0	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	CDT1 domain-containing protein.	0.556
A0A0E0PHW3	A0A0E0R0Q5	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	CDT1 domain-containing protein.	0.556
A0A0E0PKL3	A0A0E0MYQ9	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.526
A0A0E0PKL3	A0A0E0Q452	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0E0Q452	A0A0E0MYQ9	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.683
A0A0E0Q452	A0A0E0NUU9	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A0E0Q452	A0A0E0PKL3	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0E0QK27	A0A0E0MYQ9	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	Helicase ATP-binding domain-containing protein.	0.627
A0A0E0QK27	A0A0E0P5K0	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	CDT1 domain-containing protein.	0.556
A0A0E0QK27	A0A0E0R0Q5	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	CDT1 domain-containing protein.	0.556