23 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0Q089	Uncharacterized protein. (274 aa)
	A0A0E0N539	Uncharacterized protein. (631 aa)
	A0A0E0N1H1	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. (166 aa)
	A0A0E0MTL4	Uncharacterized protein; Belongs to the synaptobrevin family. (281 aa)
	A0A0E0NUB9	Uncharacterized protein. (355 aa)
	A0A0E0NUH9	GOLD domain-containing protein. (215 aa)
	A0A0E0NVQ3	GOLD domain-containing protein. (232 aa)
	A0A0E0P164	GOLD domain-containing protein. (210 aa)
	A0A0E0P268	Uncharacterized protein. (302 aa)
	A0A0E0P2D3	Uncharacterized protein; Belongs to the synaptobrevin family. (247 aa)
	A0A0E0PNA6	Uncharacterized protein. (597 aa)
	A0A0E0PPA2	Uncharacterized protein. (344 aa)
	A0A0E0PPY9	Glucosamine 6-phosphate N-acetyltransferase. (206 aa)
	A0A0E0PUP7	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	A0A0E0PUY7	GOLD domain-containing protein. (209 aa)
	A0A0E0PV89	Metallophos domain-containing protein. (363 aa)
	A0A0E0Q954	Thioredoxin domain-containing protein. (485 aa)
	A0A0E0QBN2	GOLD domain-containing protein. (230 aa)
	A0A0E0QK52	GOLD domain-containing protein. (180 aa)
	A0A0E0QLN5	GOLD domain-containing protein. (212 aa)
	A0A0E0QS95	GOLD domain-containing protein. (246 aa)
	A0A0E0QTI3	GOLD domain-containing protein. (211 aa)
	A0A0E0NLE7	GOLD domain-containing protein. (218 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MTL4	A0A0E0N1H1	Uncharacterized protein; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.632
A0A0E0MTL4	A0A0E0NLE7	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.639
A0A0E0MTL4	A0A0E0NUH9	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.639
A0A0E0MTL4	A0A0E0NVQ3	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.639
A0A0E0MTL4	A0A0E0P164	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.652
A0A0E0MTL4	A0A0E0PUY7	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.639
A0A0E0MTL4	A0A0E0QBN2	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.639
A0A0E0MTL4	A0A0E0QK52	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.639
A0A0E0MTL4	A0A0E0QLN5	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.652
A0A0E0MTL4	A0A0E0QS95	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.639
A0A0E0MTL4	A0A0E0QTI3	Uncharacterized protein; Belongs to the synaptobrevin family.	GOLD domain-containing protein.	0.652
A0A0E0N1H1	A0A0E0MTL4	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.632
A0A0E0N1H1	A0A0E0P2D3	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.632
A0A0E0N1H1	A0A0E0PUP7	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.632
A0A0E0N539	A0A0E0PNA6	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A0E0NLE7	A0A0E0MTL4	GOLD domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.639
A0A0E0NLE7	A0A0E0P164	GOLD domain-containing protein.	GOLD domain-containing protein.	0.941
A0A0E0NLE7	A0A0E0P2D3	GOLD domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.639
A0A0E0NLE7	A0A0E0PUP7	GOLD domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.639
A0A0E0NLE7	A0A0E0QLN5	GOLD domain-containing protein.	GOLD domain-containing protein.	0.935