(22 nodes) Mediator complex network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0P8B3	Uncharacterized protein. (198 aa)
	A0A0E0RJZ7	Uncharacterized protein. (224 aa)
	A0A0E0RCF5	Uncharacterized protein. (759 aa)
	A0A0E0MQZ8	Uncharacterized protein. (148 aa)
	A0A0E0MU71	Uncharacterized protein. (369 aa)
	A0A0E0MU98	Uncharacterized protein. (397 aa)
	A0A0E0MWV7	Uncharacterized protein. (203 aa)
	A0A0E0R2Z6	Protein kinase domain-containing protein. (464 aa)
	MED10	Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (190 aa)
	A0A0E0MXI1	Uncharacterized protein. (1111 aa)
	MED11	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (115 aa)
	A0A0E0QTE3	Uncharacterized protein; Belongs to the cyclin family. (277 aa)
	A0A0E0QPG6	Uncharacterized protein. (842 aa)
	A0A0E0NKK5	Uncharacterized protein. (1673 aa)
	A0A0E0QKC5	Uncharacterized protein. (148 aa)
	A0A0E0QJ62	Uncharacterized protein. (221 aa)
	A0A0E0NWP6	Uncharacterized protein. (517 aa)
	A0A0E0Q5K2	Uncharacterized protein. (1304 aa)
	A0A0E0PN89	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2011 aa)
	A0A0E0PKJ4	Uncharacterized protein. (1303 aa)
	A0A0E0PHQ9	Uncharacterized protein. (146 aa)
	A0A0E0NYR5	Uncharacterized protein. (320 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0E0MQZ8	A0A0E0MU98	A0A0E0MQZ8	A0A0E0MU98	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A0E0MQZ8	A0A0E0NKK5	A0A0E0MQZ8	A0A0E0NKK5	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A0E0MQZ8	A0A0E0NWP6	A0A0E0MQZ8	A0A0E0NWP6	Uncharacterized protein.	Uncharacterized protein.	0.490
A0A0E0MQZ8	A0A0E0NYR5	A0A0E0MQZ8	A0A0E0NYR5	Uncharacterized protein.	Uncharacterized protein.	0.435
A0A0E0MQZ8	A0A0E0PHQ9	A0A0E0MQZ8	A0A0E0PHQ9	Uncharacterized protein.	Uncharacterized protein.	0.530
A0A0E0MQZ8	A0A0E0PKJ4	A0A0E0MQZ8	A0A0E0PKJ4	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A0E0MQZ8	A0A0E0Q5K2	A0A0E0MQZ8	A0A0E0Q5K2	Uncharacterized protein.	Uncharacterized protein.	0.464
A0A0E0MQZ8	A0A0E0QPG6	A0A0E0MQZ8	A0A0E0QPG6	Uncharacterized protein.	Uncharacterized protein.	0.441
A0A0E0MQZ8	A0A0E0QTE3	A0A0E0MQZ8	A0A0E0QTE3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.955
A0A0E0MQZ8	A0A0E0R2Z6	A0A0E0MQZ8	A0A0E0R2Z6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.916
A0A0E0MQZ8	A0A0E0RJZ7	A0A0E0MQZ8	A0A0E0RJZ7	Uncharacterized protein.	Uncharacterized protein.	0.435
A0A0E0MQZ8	MED10	A0A0E0MQZ8	A0A0E0QU56	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.985
A0A0E0MQZ8	MED11	A0A0E0MQZ8	A0A0E0NAZ0	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.448
A0A0E0MU98	A0A0E0MQZ8	A0A0E0MU98	A0A0E0MQZ8	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A0E0MU98	A0A0E0MWV7	A0A0E0MU98	A0A0E0MWV7	Uncharacterized protein.	Uncharacterized protein.	0.627
A0A0E0MU98	A0A0E0NKK5	A0A0E0MU98	A0A0E0NKK5	Uncharacterized protein.	Uncharacterized protein.	0.645
A0A0E0MU98	A0A0E0NWP6	A0A0E0MU98	A0A0E0NWP6	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A0E0MU98	A0A0E0NYR5	A0A0E0MU98	A0A0E0NYR5	Uncharacterized protein.	Uncharacterized protein.	0.550
A0A0E0MU98	A0A0E0PHQ9	A0A0E0MU98	A0A0E0PHQ9	Uncharacterized protein.	Uncharacterized protein.	0.569
A0A0E0MU98	A0A0E0PKJ4	A0A0E0MU98	A0A0E0PKJ4	Uncharacterized protein.	Uncharacterized protein.	0.517