24 items (Oryza rufipogon) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0RFH5	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (576 aa)
	A0A0E0R531	DNA polymerase. (1082 aa)
	A0A0E0RHF5	RPOL4c domain-containing protein. (140 aa)
	A0A0E0R2B7	Uncharacterized protein. (492 aa)
	A0A0E0QVA0	CBFD_NFYB_HMF domain-containing protein. (167 aa)
	A0A0E0QTY0	Uncharacterized protein. (131 aa)
	A0A0E0QLY3	Uncharacterized protein. (134 aa)
	A0A0E0QK27	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (492 aa)
	A0A0E0QEQ4	Uncharacterized protein. (151 aa)
	A0A0E0QCZ6	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (327 aa)
	A0A0E0QCI3	Uncharacterized protein. (1754 aa)
	A0A0E0Q717	Uncharacterized protein. (427 aa)
	A0A0E0Q5J3	Uncharacterized protein. (347 aa)
	A0A0E0PLB1	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (426 aa)
	A0A0E0PHW3	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (500 aa)
	A0A0E0PG24	Protein kinase domain-containing protein. (278 aa)
	A0A0E0PCF2	Uncharacterized protein. (453 aa)
	A0A0E0NYP5	Uncharacterized protein; Belongs to the RecA family. (447 aa)
	A0A0E0NU89	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (341 aa)
	A0A0E0NP59	Uncharacterized protein. (447 aa)
	A0A0E0NL82	Uncharacterized protein. (555 aa)
	A0A0E0NFE0	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2143 aa)
	A0A0E0N5K1	DNA polymerase. (1506 aa)
	A0A0E0MSU3	Uncharacterized protein. (557 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MSU3	A0A0E0N5K1	Uncharacterized protein.	DNA polymerase.	0.678
A0A0E0MSU3	A0A0E0NFE0	Uncharacterized protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.817
A0A0E0MSU3	A0A0E0NP59	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A0E0MSU3	A0A0E0PG24	Uncharacterized protein.	Protein kinase domain-containing protein.	0.765
A0A0E0MSU3	A0A0E0PHW3	Uncharacterized protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.525
A0A0E0MSU3	A0A0E0PLB1	Uncharacterized protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.493
A0A0E0MSU3	A0A0E0Q5J3	Uncharacterized protein.	Uncharacterized protein.	0.784
A0A0E0MSU3	A0A0E0Q717	Uncharacterized protein.	Uncharacterized protein.	0.810
A0A0E0MSU3	A0A0E0QCI3	Uncharacterized protein.	Uncharacterized protein.	0.784
A0A0E0MSU3	A0A0E0QEQ4	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0MSU3	A0A0E0QK27	Uncharacterized protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.525
A0A0E0MSU3	A0A0E0QLY3	Uncharacterized protein.	Uncharacterized protein.	0.896
A0A0E0MSU3	A0A0E0QTY0	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0MSU3	A0A0E0R531	Uncharacterized protein.	DNA polymerase.	0.942
A0A0E0MSU3	A0A0E0RFH5	Uncharacterized protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.702
A0A0E0N5K1	A0A0E0MSU3	DNA polymerase.	Uncharacterized protein.	0.678
A0A0E0N5K1	A0A0E0NFE0	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.997
A0A0E0N5K1	A0A0E0NP59	DNA polymerase.	Uncharacterized protein.	0.984
A0A0E0N5K1	A0A0E0NU89	DNA polymerase.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.661
A0A0E0N5K1	A0A0E0NYP5	DNA polymerase.	Uncharacterized protein; Belongs to the RecA family.	0.561