25 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0R342	Uncharacterized protein. (436 aa)
	A0A0E0MSU3	Uncharacterized protein. (557 aa)
	A0A0E0N5K1	DNA polymerase. (1506 aa)
	A0A0E0NI64	Uncharacterized protein. (298 aa)
	A0A0E0NLM8	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (656 aa)
	A0A0E0NN91	RPA_C domain-containing protein. (279 aa)
	A0A0E0NP59	Uncharacterized protein. (447 aa)
	A0A0E0NRJ4	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
	A0A0E0NU89	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (341 aa)
	A0A0E0PCF2	Uncharacterized protein. (453 aa)
	A0A0E0PG24	Protein kinase domain-containing protein. (278 aa)
	A0A0E0PGK4	Uncharacterized protein. (193 aa)
	A0A0E0PLB1	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (426 aa)
	A0A0E0Q208	Uncharacterized protein. (448 aa)
	A0A0E0Q717	Uncharacterized protein. (427 aa)
	A0A0E0QCZ6	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (327 aa)
	A0A0E0QEQ4	Uncharacterized protein. (151 aa)
	A0A0E0QLY3	Uncharacterized protein. (134 aa)
	A0A0E0QTY0	Uncharacterized protein. (131 aa)
	A0A0E0R2B7	Uncharacterized protein. (492 aa)
	A0A0E0R531	DNA polymerase. (1082 aa)
	A0A0E0RB58	Uncharacterized protein. (197 aa)
	A0A0E0RBX0	Uncharacterized protein. (101 aa)
	A0A0E0RC83	Rep_fac-A_C domain-containing protein. (296 aa)
	A0A0E0RFH5	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (576 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MSU3	A0A0E0N5K1	Uncharacterized protein.	DNA polymerase.	0.678
A0A0E0MSU3	A0A0E0NP59	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A0E0MSU3	A0A0E0NRJ4	Uncharacterized protein.	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.	0.563
A0A0E0MSU3	A0A0E0PG24	Uncharacterized protein.	Protein kinase domain-containing protein.	0.765
A0A0E0MSU3	A0A0E0PLB1	Uncharacterized protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.493
A0A0E0MSU3	A0A0E0Q717	Uncharacterized protein.	Uncharacterized protein.	0.810
A0A0E0MSU3	A0A0E0QEQ4	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0MSU3	A0A0E0QLY3	Uncharacterized protein.	Uncharacterized protein.	0.896
A0A0E0MSU3	A0A0E0QTY0	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0E0MSU3	A0A0E0R531	Uncharacterized protein.	DNA polymerase.	0.942
A0A0E0MSU3	A0A0E0RFH5	Uncharacterized protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.702
A0A0E0N5K1	A0A0E0MSU3	DNA polymerase.	Uncharacterized protein.	0.678
A0A0E0N5K1	A0A0E0NI64	DNA polymerase.	Uncharacterized protein.	0.942
A0A0E0N5K1	A0A0E0NLM8	DNA polymerase.	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.	0.726
A0A0E0N5K1	A0A0E0NN91	DNA polymerase.	RPA_C domain-containing protein.	0.942
A0A0E0N5K1	A0A0E0NP59	DNA polymerase.	Uncharacterized protein.	0.984
A0A0E0N5K1	A0A0E0NRJ4	DNA polymerase.	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.	0.726
A0A0E0N5K1	A0A0E0NU89	DNA polymerase.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.661
A0A0E0N5K1	A0A0E0PCF2	DNA polymerase.	Uncharacterized protein.	0.661
A0A0E0N5K1	A0A0E0PG24	DNA polymerase.	Protein kinase domain-containing protein.	0.972