(21 nodes) Set1C/COMPASS complex network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0R503	WD_REPEATS_REGION domain-containing protein. (438 aa)
	A0A0E0R8R7	Uncharacterized protein. (432 aa)
	A0A0E0RDN6	B30.2/SPRY domain-containing protein. (214 aa)
	A0A0E0RJY5	Uncharacterized protein. (1234 aa)
	A0A0E0PZI3	Uncharacterized protein. (417 aa)
	A0A0E0MT53	Uncharacterized protein. (1671 aa)
	A0A0E0MT54	PWWP domain-containing protein. (388 aa)
	A0A0E0N056	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1022 aa)
	A0A0E0NRB0	WD_REPEATS_REGION domain-containing protein. (570 aa)
	A0A0E0NUY8	Uncharacterized protein. (909 aa)
	A0A0E0NVP6	X8 domain-containing protein. (278 aa)
	A0A0E0P0P2	WD_REPEATS_REGION domain-containing protein. (363 aa)
	A0A0E0PQN1	WD_REPEATS_REGION domain-containing protein. (331 aa)
	A0A0E0PZH1	Uncharacterized protein. (100 aa)
	A0A0E0PZI4	Uncharacterized protein. (411 aa)
	A0A0E0QA52	WD_REPEATS_REGION domain-containing protein. (339 aa)
	A0A0E0QA95	X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family. (567 aa)
	A0A0E0QAK9	WD_REPEATS_REGION domain-containing protein. (466 aa)
	A0A0E0QBN6	X8 domain-containing protein. (215 aa)
	A0A0E0QKA2	PWWP domain-containing protein. (518 aa)
	A0A0E0R443	B30.2/SPRY domain-containing protein. (418 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MT53	A0A0E0NRB0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.917
A0A0E0MT53	A0A0E0P0P2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.455
A0A0E0MT53	A0A0E0PQN1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.750
A0A0E0MT53	A0A0E0QA52	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.455
A0A0E0MT53	A0A0E0QAK9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.750
A0A0E0MT53	A0A0E0R443	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.871
A0A0E0MT53	A0A0E0RDN6	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.871
A0A0E0MT54	A0A0E0NRB0	PWWP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.917
A0A0E0MT54	A0A0E0P0P2	PWWP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.465
A0A0E0MT54	A0A0E0PQN1	PWWP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.750
A0A0E0MT54	A0A0E0QA52	PWWP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.465
A0A0E0MT54	A0A0E0QAK9	PWWP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.750
A0A0E0MT54	A0A0E0R443	PWWP domain-containing protein.	B30.2/SPRY domain-containing protein.	0.871
A0A0E0MT54	A0A0E0RDN6	PWWP domain-containing protein.	B30.2/SPRY domain-containing protein.	0.871
A0A0E0N056	A0A0E0NRB0	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.917
A0A0E0N056	A0A0E0P0P2	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.465
A0A0E0N056	A0A0E0PQN1	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.750
A0A0E0N056	A0A0E0QA52	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.465
A0A0E0N056	A0A0E0QAK9	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.750
A0A0E0N056	A0A0E0R443	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	B30.2/SPRY domain-containing protein.	0.871