(9 nodes) Exoribonuclease, phosphorolytic domain 1 network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0R7F5	Uncharacterized protein. (306 aa)
	A0A0E0NHU3	Uncharacterized protein. (1505 aa)
	A0A0E0NG96	Uncharacterized protein. (451 aa)
	A0A0E0P3T1	Uncharacterized protein. (260 aa)
	A0A0E0P428	RNase_PH domain-containing protein. (238 aa)
	A0A0E0Q4J3	S1 motif domain-containing protein. (850 aa)
	A0A0E0QDM2	Uncharacterized protein. (262 aa)
	A0A0E0QNK2	Uncharacterized protein. (234 aa)
	A0A0E0RG97	Uncharacterized protein. (284 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0NG96	A0A0E0P3T1	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A0E0NG96	A0A0E0P428	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A0E0NG96	A0A0E0QDM2	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A0E0NG96	A0A0E0QNK2	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A0E0NG96	A0A0E0R7F5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A0E0NG96	A0A0E0RG97	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A0E0NHU3	A0A0E0P3T1	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A0E0NHU3	A0A0E0P428	Uncharacterized protein.	RNase_PH domain-containing protein.	0.697
A0A0E0NHU3	A0A0E0Q4J3	Uncharacterized protein.	S1 motif domain-containing protein.	0.940
A0A0E0NHU3	A0A0E0QDM2	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A0E0NHU3	A0A0E0QNK2	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A0E0NHU3	A0A0E0R7F5	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A0E0P3T1	A0A0E0NG96	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A0E0P3T1	A0A0E0NHU3	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A0E0P3T1	A0A0E0P428	Uncharacterized protein.	RNase_PH domain-containing protein.	0.986
A0A0E0P3T1	A0A0E0Q4J3	Uncharacterized protein.	S1 motif domain-containing protein.	0.697
A0A0E0P3T1	A0A0E0QNK2	Uncharacterized protein.	Uncharacterized protein.	0.910
A0A0E0P3T1	A0A0E0R7F5	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A0E0P3T1	A0A0E0RG97	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0E0P428	A0A0E0NG96	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999