39 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0MX70	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (167 aa)
	A0A0E0NJG7	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (438 aa)
	A0A0E0NMD5	Uncharacterized protein; Belongs to the synaptobrevin family. (226 aa)
	A0A0E0NQ51	Uncharacterized protein; Belongs to the synaptobrevin family. (223 aa)
	A0A0E0NRY9	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (166 aa)
	A0A0E0P256	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (119 aa)
	A0A0E0P2D3	Uncharacterized protein; Belongs to the synaptobrevin family. (247 aa)
	A0A0E0P2Q7	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	A0A0E0P2Y2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (137 aa)
	A0A0E0P442	Ku domain-containing protein. (895 aa)
	A0A0E0PB89	Uncharacterized protein. (145 aa)
	A0A0E0PKI9	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1047 aa)
	A0A0E0PLT9	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (414 aa)
	A0A0E0PNK4	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (177 aa)
	A0A0E0PQM9	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (424 aa)
	A0A0E0PTL8	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (143 aa)
	A0A0E0PU64	Uncharacterized protein; Belongs to the synaptobrevin family. (221 aa)
	A0A0E0PUP7	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	A0A0E0Q576	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	A0A0E0Q672	Uncharacterized protein; Belongs to the synaptobrevin family. (248 aa)
	A0A0E0N1C1	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (429 aa)
	A0A0E0Q7R1	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (143 aa)
	A0A0E0QBD8	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (405 aa)
	A0A0E0N5H5	Uncharacterized protein; Belongs to the synaptobrevin family. (206 aa)
	A0A0E0QDH6	Uncharacterized protein. (277 aa)
	A0A0E0QI53	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (670 aa)
	A0A0E0QIK7	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	A0A0E0QKB9	SRP54 domain-containing protein. (624 aa)
	A0A0E0QMC3	Uncharacterized protein; Belongs to the synaptobrevin family. (524 aa)
	A0A0E0QUI3	DUF1279 domain-containing protein. (326 aa)
	A0A0E0QWC4	Uncharacterized protein; Belongs to the synaptobrevin family. (257 aa)
	A0A0E0N4K2	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (519 aa)
	A0A0E0N4R2	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (280 aa)
	A0A0E0QY84	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	A0A0E0RF32	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	A0A0E0N7Z7	Uncharacterized protein. (172 aa)
	A0A0E0NDS6	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (182 aa)
	A0A0E0NHQ3	Uncharacterized protein. (112 aa)
	A0A0E0MTL4	Uncharacterized protein; Belongs to the synaptobrevin family. (281 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MTL4	A0A0E0MX70	Uncharacterized protein; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.699
A0A0E0MTL4	A0A0E0N4K2	Uncharacterized protein; Belongs to the synaptobrevin family.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.705
A0A0E0MTL4	A0A0E0N4R2	Uncharacterized protein; Belongs to the synaptobrevin family.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.683
A0A0E0MTL4	A0A0E0N5H5	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.907
A0A0E0MTL4	A0A0E0N7Z7	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.907
A0A0E0MTL4	A0A0E0NDS6	Uncharacterized protein; Belongs to the synaptobrevin family.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.683
A0A0E0MTL4	A0A0E0NHQ3	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.593
A0A0E0MTL4	A0A0E0PB89	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.593
A0A0E0MTL4	A0A0E0PKI9	Uncharacterized protein; Belongs to the synaptobrevin family.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.	0.705
A0A0E0MTL4	A0A0E0PNK4	Uncharacterized protein; Belongs to the synaptobrevin family.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.683
A0A0E0MTL4	A0A0E0PTL8	Uncharacterized protein; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.557
A0A0E0MTL4	A0A0E0Q7R1	Uncharacterized protein; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.557
A0A0E0MTL4	A0A0E0QI53	Uncharacterized protein; Belongs to the synaptobrevin family.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.	0.705
A0A0E0MTL4	A0A0E0QUI3	Uncharacterized protein; Belongs to the synaptobrevin family.	DUF1279 domain-containing protein.	0.556
A0A0E0MX70	A0A0E0MTL4	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.699
A0A0E0MX70	A0A0E0N5H5	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.758
A0A0E0MX70	A0A0E0N7Z7	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.758
A0A0E0MX70	A0A0E0NHQ3	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.984
A0A0E0MX70	A0A0E0P2D3	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.699
A0A0E0MX70	A0A0E0PB89	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.984