(12 nodes) ATP-grasp fold, subdomain 1 network (Oryza rufipogon)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0QFB2	ATP-grasp domain-containing protein. (527 aa)
	A0A0E0QD26	Uncharacterized protein. (880 aa)
	A0A0E0PYA2	PPDK_N domain-containing protein. (1467 aa)
	A0A0E0PMB6	Uncharacterized protein. (843 aa)
	A0A0E0QY51	Uncharacterized protein. (2281 aa)
	A0A0E0PK84	Uncharacterized protein. (2409 aa)
	A0A0E0NWX2	Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (887 aa)
	A0A0E0NHX7	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (422 aa)
	A0A0E0MY77	Uncharacterized protein. (1092 aa)
	A0A0E0MSP7	ATP-grasp domain-containing protein. (829 aa)
	A0A0E0REW3	ATP-grasp domain-containing protein. (518 aa)
	A0A0E0RG85	CBM20 domain-containing protein. (1174 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MSP7	A0A0E0MY77	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.462
A0A0E0MSP7	A0A0E0PK84	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.745
A0A0E0MSP7	A0A0E0QFB2	ATP-grasp domain-containing protein.	ATP-grasp domain-containing protein.	0.989
A0A0E0MSP7	A0A0E0QY51	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.745
A0A0E0MSP7	A0A0E0REW3	ATP-grasp domain-containing protein.	ATP-grasp domain-containing protein.	0.989
A0A0E0MY77	A0A0E0MSP7	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.462
A0A0E0MY77	A0A0E0PK84	Uncharacterized protein.	Uncharacterized protein.	0.780
A0A0E0MY77	A0A0E0QFB2	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.827
A0A0E0MY77	A0A0E0QY51	Uncharacterized protein.	Uncharacterized protein.	0.768
A0A0E0MY77	A0A0E0REW3	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.827
A0A0E0NHX7	A0A0E0PK84	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	Uncharacterized protein.	0.922
A0A0E0NHX7	A0A0E0QY51	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	Uncharacterized protein.	0.922
A0A0E0NWX2	A0A0E0PMB6	Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.	Uncharacterized protein.	0.931
A0A0E0PK84	A0A0E0MSP7	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.745
A0A0E0PK84	A0A0E0MY77	Uncharacterized protein.	Uncharacterized protein.	0.780
A0A0E0PK84	A0A0E0NHX7	Uncharacterized protein.	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	0.922
A0A0E0PK84	A0A0E0QFB2	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.776
A0A0E0PK84	A0A0E0QY51	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A0E0PK84	A0A0E0REW3	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.776
A0A0E0PMB6	A0A0E0NWX2	Uncharacterized protein.	Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.	0.931