(16 nodes) Ubiquitin domain network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NS34	Ubiquitin-like domain-containing protein. (129 aa)
	A0A0E0R1Z0	Ubiquitin-like domain-containing protein. (81 aa)
	A0A0E0R0C2	Uncharacterized protein. (328 aa)
	A0A0E0QX90	Uncharacterized protein. (828 aa)
	A0A0E0QSY4	Ubiquitin-like domain-containing protein. (224 aa)
	A0A0E0QRH9	Uncharacterized protein. (153 aa)
	A0A0E0QH02	Ubiquitin-like domain-containing protein. (745 aa)
	A0A0E0QF83	Ubiquitin-like domain-containing protein. (245 aa)
	A0A0E0QF77	Ubiquitin-like domain-containing protein. (276 aa)
	A0A0E0Q8G8	Ubiquitin-like domain-containing protein. (86 aa)
	A0A0E0Q8E5	Ubiquitin-like domain-containing protein. (143 aa)
	A0A0E0Q0W7	Uncharacterized protein. (153 aa)
	A0A0E0PNH4	Ubiquitin-like domain-containing protein. (90 aa)
	A0A0E0PHV9	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0E0MZV2	Uncharacterized protein. (421 aa)
	A0A0E0MVN0	Ubiquitin-like domain-containing protein. (155 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MVN0	A0A0E0MZV2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.841
A0A0E0MVN0	A0A0E0NS34	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.995
A0A0E0MVN0	A0A0E0PHV9	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.931
A0A0E0MVN0	A0A0E0PNH4	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.866
A0A0E0MVN0	A0A0E0Q0W7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.976
A0A0E0MVN0	A0A0E0Q8E5	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.997
A0A0E0MVN0	A0A0E0Q8G8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.839
A0A0E0MVN0	A0A0E0QF77	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.873
A0A0E0MVN0	A0A0E0QF83	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.876
A0A0E0MVN0	A0A0E0QH02	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.574
A0A0E0MVN0	A0A0E0QRH9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.910
A0A0E0MVN0	A0A0E0QSY4	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.990
A0A0E0MVN0	A0A0E0R0C2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.878
A0A0E0MVN0	A0A0E0R1Z0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.841
A0A0E0MZV2	A0A0E0MVN0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.841
A0A0E0MZV2	A0A0E0NS34	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.737
A0A0E0MZV2	A0A0E0PHV9	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.841
A0A0E0MZV2	A0A0E0Q8E5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.740
A0A0E0MZV2	A0A0E0QF77	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.417
A0A0E0MZV2	A0A0E0QF83	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.431