(40 nodes) K Homology domain, type 1 superfamily network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0PBN2	S1 domain-containing protein. (335 aa)
	A0A0E0PFB8	Uncharacterized protein. (479 aa)
	A0A0E0PMM3	KH domain-containing protein. (291 aa)
	A0A0E0Q5S1	KH domain-containing protein. (286 aa)
	A0A0E0PP30	KH domain-containing protein. (278 aa)
	A0A0E0PXH5	Uncharacterized protein. (662 aa)
	A0A0E0Q069	Uncharacterized protein. (371 aa)
	A0A0E0Q4J3	S1 motif domain-containing protein. (850 aa)
	A0A0E0QTA4	Uncharacterized protein. (629 aa)
	A0A0E0QZ37	Uncharacterized protein. (619 aa)
	A0A0E0QZV2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (378 aa)
	A0A0E0QFI3	Uncharacterized protein. (612 aa)
	A0A0E0QDI2	Uncharacterized protein. (710 aa)
	A0A0E0QD72	Uncharacterized protein. (754 aa)
	A0A0E0Q7I6	Uncharacterized protein. (676 aa)
	A0A0E0R0U8	Uncharacterized protein. (736 aa)
	A0A0E0R0X7	KH domain-containing protein. (814 aa)
	A0A0E0R2K1	Uncharacterized protein. (458 aa)
	A0A0E0R2L7	Uncharacterized protein. (807 aa)
	A0A0E0RJK6	Uncharacterized protein. (592 aa)
	A0A0E0P315	KH domain-containing protein. (281 aa)
	A0A0E0NYH5	Uncharacterized protein. (510 aa)
	A0A0E0NVQ7	Uncharacterized protein. (574 aa)
	A0A0E0NRI8	Uncharacterized protein. (716 aa)
	A0A0E0MTI4	Protein kinase domain-containing protein. (1664 aa)
	A0A0E0MTN0	Uncharacterized protein. (764 aa)
	A0A0E0MXJ4	Beta-galactosidase. (2734 aa)
	A0A0E0MY61	Uncharacterized protein. (307 aa)
	A0A0E0N1L2	KH_8 domain-containing protein. (421 aa)
	A0A0E0N3H3	KH domain-containing protein. (220 aa)
	A0A0E0N451	KH domain-containing protein. (291 aa)
	A0A0E0N5Z8	KH domain-containing protein. (290 aa)
	A0A0E0N642	KH_dom_type_1 domain-containing protein. (249 aa)
	A0A0E0N955	Uncharacterized protein. (442 aa)
	A0A0E0NB44	Uncharacterized protein. (300 aa)
	A0A0E0NBX9	Uncharacterized protein. (822 aa)
	A0A0E0NKA3	KH domain-containing protein. (286 aa)
	A0A0E0NN04	Uncharacterized protein. (361 aa)
	A0A0E0NNS2	KH domain-containing protein. (227 aa)
	A0A0E0P890	Uncharacterized protein. (684 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MTI4	A0A0E0N3H3	Protein kinase domain-containing protein.	KH domain-containing protein.	0.670
A0A0E0MTI4	A0A0E0NNS2	Protein kinase domain-containing protein.	KH domain-containing protein.	0.670
A0A0E0N1L2	A0A0E0N3H3	KH_8 domain-containing protein.	KH domain-containing protein.	0.949
A0A0E0N1L2	A0A0E0N642	KH_8 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.950
A0A0E0N1L2	A0A0E0NNS2	KH_8 domain-containing protein.	KH domain-containing protein.	0.949
A0A0E0N1L2	A0A0E0PBN2	KH_8 domain-containing protein.	S1 domain-containing protein.	0.938
A0A0E0N3H3	A0A0E0MTI4	KH domain-containing protein.	Protein kinase domain-containing protein.	0.670
A0A0E0N3H3	A0A0E0N1L2	KH domain-containing protein.	KH_8 domain-containing protein.	0.949
A0A0E0N3H3	A0A0E0N642	KH domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.777
A0A0E0N3H3	A0A0E0PBN2	KH domain-containing protein.	S1 domain-containing protein.	0.793
A0A0E0N3H3	A0A0E0QZV2	KH domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.949
A0A0E0N451	A0A0E0NBX9	KH domain-containing protein.	Uncharacterized protein.	0.415
A0A0E0N451	A0A0E0QDI2	KH domain-containing protein.	Uncharacterized protein.	0.415
A0A0E0N5Z8	A0A0E0NBX9	KH domain-containing protein.	Uncharacterized protein.	0.415
A0A0E0N5Z8	A0A0E0QDI2	KH domain-containing protein.	Uncharacterized protein.	0.415
A0A0E0N642	A0A0E0N1L2	KH_dom_type_1 domain-containing protein.	KH_8 domain-containing protein.	0.950
A0A0E0N642	A0A0E0N3H3	KH_dom_type_1 domain-containing protein.	KH domain-containing protein.	0.777
A0A0E0N642	A0A0E0NBX9	KH_dom_type_1 domain-containing protein.	Uncharacterized protein.	0.633
A0A0E0N642	A0A0E0NNS2	KH_dom_type_1 domain-containing protein.	KH domain-containing protein.	0.777
A0A0E0N642	A0A0E0PBN2	KH_dom_type_1 domain-containing protein.	S1 domain-containing protein.	0.999