STRINGSTRING
A0A0E0N0U7 A0A0E0N0U7 A0A0E0MXR8 A0A0E0MXR8 A0A0E0MTW9 A0A0E0MTW9 A0A0E0MSC8 A0A0E0MSC8 MCM7 MCM7 A0A0E0PHC8 A0A0E0PHC8 A0A0E0PHW3 A0A0E0PHW3 A0A0E0PIC5 A0A0E0PIC5 A0A0E0PJC1 A0A0E0PJC1 A0A0E0PLB1 A0A0E0PLB1 A0A0E0PND8 A0A0E0PND8 A0A0E0PNX3 A0A0E0PNX3 A0A0E0PU14 A0A0E0PU14 A0A0E0PUF9 A0A0E0PUF9 A0A0E0QGN2 A0A0E0QGN2 A0A0E0QK27 A0A0E0QK27 A0A0E0R0P3 A0A0E0R0P3 A0A0E0R531 A0A0E0R531 A0A0E0R8F7 A0A0E0R8F7 A0A0E0R9X8 A0A0E0R9X8 A0A0E0RFH5 A0A0E0RFH5 A0A0E0NRJ4 A0A0E0NRJ4 A0A0E0NMF4 A0A0E0NMF4 A0A0E0NME6 A0A0E0NME6 A0A0E0NM64 A0A0E0NM64 A0A0E0NLM8 A0A0E0NLM8 A0A0E0NFE0 A0A0E0NFE0 A0A0E0N5K1 A0A0E0N5K1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0E0N0U7Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (381 aa)
A0A0E0MXR8DNA helicase; Belongs to the MCM family. (853 aa)
A0A0E0MTW9DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (228 aa)
A0A0E0MSC8FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (684 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (715 aa)
A0A0E0PHC8DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (228 aa)
A0A0E0PHW3DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (500 aa)
A0A0E0PIC5FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (640 aa)
A0A0E0PJC1DNA helicase; Belongs to the MCM family. (814 aa)
A0A0E0PLB1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (426 aa)
A0A0E0PND8Sld5 domain-containing protein. (210 aa)
A0A0E0PNX3DNA helicase; Belongs to the MCM family. (770 aa)
A0A0E0PU14Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (865 aa)
A0A0E0PUF9Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (1164 aa)
A0A0E0QGN2Sld5 domain-containing protein. (194 aa)
A0A0E0QK27DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (492 aa)
A0A0E0R0P3DNA ligase. (912 aa)
A0A0E0R531DNA polymerase. (1082 aa)
A0A0E0R8F7DNA helicase; Belongs to the MCM family. (1258 aa)
A0A0E0R9X8Replication factor C subunit 1. (987 aa)
A0A0E0RFH5DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (576 aa)
A0A0E0NRJ4Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
A0A0E0NMF4Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
A0A0E0NME6Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (810 aa)
A0A0E0NM64DNA helicase; Belongs to the MCM family. (698 aa)
A0A0E0NLM8Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (656 aa)
A0A0E0NFE0DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2143 aa)
A0A0E0N5K1DNA polymerase. (1506 aa)
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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