44 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0QEK5	NAC domain-containing protein. (729 aa)
	A0A0E0QEQ4	Uncharacterized protein. (151 aa)
	A0A0E0QLD5	Uncharacterized protein. (353 aa)
	A0A0E0QLY3	Uncharacterized protein. (134 aa)
	A0A0E0QTY0	Uncharacterized protein. (131 aa)
	A0A0E0QZ31	NAC domain-containing protein. (543 aa)
	A0A0E0R0E1	NAC domain-containing protein. (324 aa)
	A0A0E0R2U2	Uncharacterized protein. (451 aa)
	A0A0E0R342	Uncharacterized protein. (436 aa)
	A0A0E0R5K4	DUF223 domain-containing protein. (362 aa)
	A0A0E0R6A8	DNA_pol3_gamma3 domain-containing protein. (1183 aa)
	A0A0E0R9X8	Replication factor C subunit 1. (987 aa)
	A0A0E0RAG3	Rep_fac-A_C domain-containing protein. (458 aa)
	A0A0E0RB58	Uncharacterized protein. (197 aa)
	A0A0E0RBX0	Uncharacterized protein. (101 aa)
	A0A0E0RC83	Rep_fac-A_C domain-containing protein. (296 aa)
	A0A0E0RF42	DNA_pol3_gamma3 domain-containing protein. (1174 aa)
	A0A0E0RHQ7	Uncharacterized protein. (321 aa)
	A0A0E0RG45	AAA domain-containing protein. (963 aa)
	A0A0E0MR78	Uncharacterized protein. (214 aa)
	A0A0E0MVN0	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0E0N218	DNA_pol3_gamma3 domain-containing protein. (1022 aa)
	A0A0E0NEX1	Uncharacterized protein. (306 aa)
	A0A0E0NHY8	NAC domain-containing protein. (283 aa)
	A0A0E0NJU4	Uncharacterized protein. (729 aa)
	A0A0E0NLL5	AAA domain-containing protein. (346 aa)
	A0A0E0NLM8	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (656 aa)
	A0A0E0NML9	NAC domain-containing protein. (331 aa)
	A0A0E0NNK7	NAC domain-containing protein. (297 aa)
	A0A0E0NRJ4	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
	A0A0E0NSS6	AAA domain-containing protein. (1233 aa)
	A0A0E0NWW7	Uncharacterized protein. (860 aa)
	A0A0E0NY93	UmuC domain-containing protein. (662 aa)
	A0A0E0P2E5	AAA domain-containing protein. (353 aa)
	A0A0E0P437	Uncharacterized protein. (547 aa)
	A0A0E0PBK5	NAC domain-containing protein. (278 aa)
	A0A0E0PCU4	AAA domain-containing protein. (344 aa)
	A0A0E0PGK4	Uncharacterized protein. (193 aa)
	A0A0E0PHV9	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0E0PP39	Uncharacterized protein. (636 aa)
	A0A0E0PQ99	DNA_pol3_gamma3 domain-containing protein. (1083 aa)
	A0A0E0PSB2	NAC domain-containing protein. (683 aa)
	A0A0E0QBV2	Uncharacterized protein. (598 aa)
	A0A0E0QDQ7	AAA domain-containing protein. (733 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MR78	A0A0E0MVN0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.474
A0A0E0MR78	A0A0E0N218	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.562
A0A0E0MR78	A0A0E0NJU4	Uncharacterized protein.	Uncharacterized protein.	0.644
A0A0E0MR78	A0A0E0NLL5	Uncharacterized protein.	AAA domain-containing protein.	0.675
A0A0E0MR78	A0A0E0NSS6	Uncharacterized protein.	AAA domain-containing protein.	0.706
A0A0E0MR78	A0A0E0NWW7	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A0E0MR78	A0A0E0NY93	Uncharacterized protein.	UmuC domain-containing protein.	0.510
A0A0E0MR78	A0A0E0P2E5	Uncharacterized protein.	AAA domain-containing protein.	0.644
A0A0E0MR78	A0A0E0PCU4	Uncharacterized protein.	AAA domain-containing protein.	0.690
A0A0E0MR78	A0A0E0PHV9	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.474
A0A0E0MR78	A0A0E0PQ99	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.562
A0A0E0MR78	A0A0E0QDQ7	Uncharacterized protein.	AAA domain-containing protein.	0.562
A0A0E0MR78	A0A0E0R2U2	Uncharacterized protein.	Uncharacterized protein.	0.644
A0A0E0MR78	A0A0E0R6A8	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.562
A0A0E0MR78	A0A0E0R9X8	Uncharacterized protein.	Replication factor C subunit 1.	0.706
A0A0E0MR78	A0A0E0RF42	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.562
A0A0E0MR78	A0A0E0RG45	Uncharacterized protein.	AAA domain-containing protein.	0.562
A0A0E0MVN0	A0A0E0MR78	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.474
A0A0E0MVN0	A0A0E0N218	Ubiquitin-like domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.582
A0A0E0MVN0	A0A0E0NEX1	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.474