22 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NP59	Uncharacterized protein. (447 aa)
	A0A0E0RG45	AAA domain-containing protein. (963 aa)
	A0A0E0RFH5	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (576 aa)
	A0A0E0RF42	DNA_pol3_gamma3 domain-containing protein. (1174 aa)
	A0A0E0R9X8	Replication factor C subunit 1. (987 aa)
	A0A0E0R6A8	DNA_pol3_gamma3 domain-containing protein. (1183 aa)
	A0A0E0R2U2	Uncharacterized protein. (451 aa)
	A0A0E0QTY0	Uncharacterized protein. (131 aa)
	A0A0E0QLY3	Uncharacterized protein. (134 aa)
	A0A0E0QEQ4	Uncharacterized protein. (151 aa)
	A0A0E0QDQ7	AAA domain-containing protein. (733 aa)
	A0A0E0Q717	Uncharacterized protein. (427 aa)
	A0A0E0PQ99	DNA_pol3_gamma3 domain-containing protein. (1083 aa)
	A0A0E0PLB1	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (426 aa)
	A0A0E0PCU4	AAA domain-containing protein. (344 aa)
	A0A0E0P2E5	AAA domain-containing protein. (353 aa)
	A0A0E0NSS6	AAA domain-containing protein. (1233 aa)
	A0A0E0NMF4	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
	A0A0E0NLL5	AAA domain-containing protein. (346 aa)
	A0A0E0NJU4	Uncharacterized protein. (729 aa)
	A0A0E0N5K1	DNA polymerase. (1506 aa)
	A0A0E0N218	DNA_pol3_gamma3 domain-containing protein. (1022 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0N218	A0A0E0N5K1	DNA_pol3_gamma3 domain-containing protein.	DNA polymerase.	0.839
A0A0E0N218	A0A0E0NJU4	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.965
A0A0E0N218	A0A0E0NLL5	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.990
A0A0E0N218	A0A0E0NMF4	DNA_pol3_gamma3 domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.993
A0A0E0N218	A0A0E0NP59	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.910
A0A0E0N218	A0A0E0NSS6	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.930
A0A0E0N218	A0A0E0P2E5	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.965
A0A0E0N218	A0A0E0PCU4	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.978
A0A0E0N218	A0A0E0PLB1	DNA_pol3_gamma3 domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.967
A0A0E0N218	A0A0E0Q717	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.955
A0A0E0N218	A0A0E0QDQ7	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.435
A0A0E0N218	A0A0E0R2U2	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.965
A0A0E0N218	A0A0E0R6A8	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.450
A0A0E0N218	A0A0E0R9X8	DNA_pol3_gamma3 domain-containing protein.	Replication factor C subunit 1.	0.930
A0A0E0N218	A0A0E0RF42	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.448
A0A0E0N218	A0A0E0RFH5	DNA_pol3_gamma3 domain-containing protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.871
A0A0E0N218	A0A0E0RG45	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.448
A0A0E0N5K1	A0A0E0N218	DNA polymerase.	DNA_pol3_gamma3 domain-containing protein.	0.839
A0A0E0N5K1	A0A0E0NJU4	DNA polymerase.	Uncharacterized protein.	0.881
A0A0E0N5K1	A0A0E0NLL5	DNA polymerase.	AAA domain-containing protein.	0.939