10 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0RGJ0	Uncharacterized protein. (219 aa)
	A0A0E0MVN0	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0E0NLH7	Uncharacterized protein. (204 aa)
	A0A0E0P1D9	COR domain-containing protein. (1342 aa)
	A0A0E0RGJ1	PsaL domain-containing protein. (201 aa)
	A0A0E0PHV9	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0E0PUX5	Uncharacterized protein. (212 aa)
	A0A0E0PVK5	Uncharacterized protein. (616 aa)
	A0A0E0QF89	TMEM189_B_dmain domain-containing protein. (291 aa)
	A0A0E0QN99	Uncharacterized protein. (257 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MVN0	A0A0E0P1D9	Ubiquitin-like domain-containing protein.	COR domain-containing protein.	0.697
A0A0E0MVN0	A0A0E0PHV9	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.931
A0A0E0MVN0	A0A0E0PVK5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.697
A0A0E0MVN0	A0A0E0QF89	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.949
A0A0E0P1D9	A0A0E0MVN0	COR domain-containing protein.	Ubiquitin-like domain-containing protein.	0.697
A0A0E0P1D9	A0A0E0PHV9	COR domain-containing protein.	Ubiquitin-like domain-containing protein.	0.697
A0A0E0PHV9	A0A0E0MVN0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.931
A0A0E0PHV9	A0A0E0P1D9	Ubiquitin-like domain-containing protein.	COR domain-containing protein.	0.697
A0A0E0PHV9	A0A0E0PVK5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.697
A0A0E0PHV9	A0A0E0QF89	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.949
A0A0E0PVK5	A0A0E0MVN0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.697
A0A0E0PVK5	A0A0E0PHV9	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.697
A0A0E0QF89	A0A0E0MVN0	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.949
A0A0E0QF89	A0A0E0PHV9	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.949