(16 nodes) DUF761-associated sequence motif network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NTE4	Uncharacterized protein. (1046 aa)
	A0A0E0NHT3	Uncharacterized protein. (925 aa)
	A0A0E0MR04	Uncharacterized protein. (885 aa)
	A0A0E0MTF5	VARLMGL domain-containing protein. (687 aa)
	A0A0E0MU76	VARLMGL domain-containing protein. (283 aa)
	A0A0E0RAA2	Uncharacterized protein. (911 aa)
	A0A0E0Q388	Uncharacterized protein. (1090 aa)
	A0A0E0PQV3	Uncharacterized protein. (911 aa)
	A0A0E0PH02	VARLMGL domain-containing protein. (364 aa)
	A0A0E0PGQ6	Uncharacterized protein. (979 aa)
	A0A0E0PBB6	Uncharacterized protein. (949 aa)
	A0A0E0P4E6	Uncharacterized protein. (615 aa)
	A0A0E0P3H5	Uncharacterized protein. (886 aa)
	A0A0E0P3D1	Uncharacterized protein. (758 aa)
	A0A0E0P1Y6	VARLMGL domain-containing protein. (943 aa)
	A0A0E0NTY6	Uncharacterized protein. (953 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0NHT3	A0A0E0P3H5	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A0E0NHT3	A0A0E0Q388	Uncharacterized protein.	Uncharacterized protein.	0.464
A0A0E0NTE4	A0A0E0P3H5	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A0E0NTE4	A0A0E0P4E6	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A0E0NTE4	A0A0E0RAA2	Uncharacterized protein.	Uncharacterized protein.	0.435
A0A0E0NTY6	A0A0E0RAA2	Uncharacterized protein.	Uncharacterized protein.	0.527
A0A0E0P3D1	A0A0E0P3H5	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A0E0P3D1	A0A0E0P4E6	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A0E0P3H5	A0A0E0NHT3	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A0E0P3H5	A0A0E0NTE4	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A0E0P3H5	A0A0E0P3D1	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A0E0P3H5	A0A0E0PBB6	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A0E0P3H5	A0A0E0PGQ6	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A0E0P3H5	A0A0E0Q388	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A0E0P3H5	A0A0E0RAA2	Uncharacterized protein.	Uncharacterized protein.	0.635
A0A0E0P4E6	A0A0E0NTE4	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A0E0P4E6	A0A0E0P3D1	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A0E0P4E6	A0A0E0PGQ6	Uncharacterized protein.	Uncharacterized protein.	0.456
A0A0E0PBB6	A0A0E0P3H5	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A0E0PBB6	A0A0E0Q388	Uncharacterized protein.	Uncharacterized protein.	0.477