(112 nodes) Lysine degradation network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NIG3	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (464 aa)
	A0A0E0NKW9	RWP-RK domain-containing protein. (232 aa)
	A0A0E0NLU2	Uncharacterized protein. (1169 aa)
	A0A0E0NPF9	Uncharacterized protein. (604 aa)
	A0A0E0NQ95	Uncharacterized protein. (536 aa)
	A0A0E0NQF0	Uncharacterized protein. (66 aa)
	A0A0E0NQH9	Cupin type-1 domain-containing protein. (1503 aa)
	A0A0E0NSU1	Uncharacterized protein. (113 aa)
	A0A0E0NSX4	Uncharacterized protein. (343 aa)
	A0A0E0NSY5	Uncharacterized protein. (899 aa)
	A0A0E0NU23	SET domain-containing protein. (910 aa)
	A0A0E0NU48	Uncharacterized protein. (312 aa)
	A0A0E0NUB2	Uncharacterized protein. (558 aa)
	A0A0E0NWN2	PHB domain-containing protein. (352 aa)
	A0A0E0NZ57	Pyr_redox domain-containing protein. (229 aa)
	A0A0E0P063	SET domain-containing protein. (300 aa)
	A0A0E0P0H1	PHD domain-containing protein. (697 aa)
	A0A0E0P3Y5	Uncharacterized protein. (64 aa)
	A0A0E0P825	Rab-GAP TBC domain-containing protein. (453 aa)
	A0A0E0P8F6	Lipoyl-binding domain-containing protein. (440 aa)
	A0A0E0P956	SET domain-containing protein. (982 aa)
	A0A0E0P982	Uncharacterized protein. (537 aa)
	A0A0E0PC54	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (490 aa)
	A0A0E0PC85	Uncharacterized protein. (933 aa)
	A0A0E0PEG4	Uncharacterized protein. (518 aa)
	A0A0E0PG92	Uncharacterized protein. (763 aa)
	A0A0E0PHS6	Dihydrolipoyl dehydrogenase. (590 aa)
	A0A0E0PHV7	Dihydrolipoyl dehydrogenase. (504 aa)
	A0A0E0PPA7	Uncharacterized protein. (672 aa)
	A0A0E0PSY7	Uncharacterized protein. (530 aa)
	A0A0E0PW89	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (549 aa)
	A0A0E0PWC1	Uncharacterized protein. (996 aa)
	A0A0E0PZH1	Uncharacterized protein. (100 aa)
	A0A0E0PZI3	Uncharacterized protein. (417 aa)
	A0A0E0PZI4	Uncharacterized protein. (411 aa)
	A0A0E0Q2W6	Uncharacterized protein. (352 aa)
	A0A0E0Q7F2	Uncharacterized protein. (708 aa)
	A0A0E0Q864	MYND-type domain-containing protein. (296 aa)
	A0A0E0QCA8	Uncharacterized protein. (1732 aa)
	A0A0E0QCI0	BTB domain-containing protein. (439 aa)
	A0A0E0QDC5	Uncharacterized protein. (563 aa)
	A0A0E0QF54	SET domain-containing protein. (2246 aa)
	A0A0E0QFL4	SET domain-containing protein. (389 aa)
	A0A0E0QHK1	DNMT1-RFD domain-containing protein. (741 aa)
	A0A0E0QHL0	Uncharacterized protein. (1370 aa)
	A0A0E0QHL2	Uncharacterized protein. (1295 aa)
	A0A0E0QIN5	Uncharacterized protein. (1230 aa)
	A0A0E0QIP0	YDG domain-containing protein. (1068 aa)
	A0A0E0QIP5	Uncharacterized protein. (1173 aa)
	A0A0E0QJE4	Uncharacterized protein. (375 aa)
	A0A0E0QJM1	Uncharacterized protein. (520 aa)
	A0A0E0QJQ0	Uncharacterized protein. (81 aa)
	A0A0E0QKA2	PWWP domain-containing protein. (518 aa)
	A0A0E0QKU0	Uncharacterized protein. (944 aa)
	A0A0E0QMI8	Uncharacterized protein. (594 aa)
	A0A0E0QMV6	WIYLD domain-containing protein. (218 aa)
	A0A0E0QMV8	Uncharacterized protein. (91 aa)
	A0A0E0QMV9	WIYLD domain-containing protein. (221 aa)
	A0A0E0QN85	Uncharacterized protein. (1048 aa)
	A0A0E0QNK4	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
	A0A0E0QPH3	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (513 aa)
	A0A0E0QQD1	Uncharacterized protein. (1202 aa)
	A0A0E0QRG1	Uncharacterized protein. (350 aa)
	A0A0E0QRY6	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (336 aa)
	A0A0E0QS56	PHD domain-containing protein. (683 aa)
	A0A0E0QTA3	DAO domain-containing protein. (419 aa)
	A0A0E0QUZ0	Uncharacterized protein. (1764 aa)
	A0A0E0QZ02	SET domain-containing protein. (298 aa)
	A0A0E0R0R0	Uncharacterized protein. (233 aa)
	A0A0E0R0R1	Uncharacterized protein. (230 aa)
	A0A0E0R0R2	Uncharacterized protein. (229 aa)
	A0A0E0R152	Uncharacterized protein. (793 aa)
	A0A0E0R2N1	Uncharacterized protein. (215 aa)
	A0A0E0R2N2	Uncharacterized protein. (145 aa)
	A0A0E0R3Q4	Uncharacterized protein. (486 aa)
	A0A0E0R528	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (494 aa)
	A0A0E0R650	PHD-type domain-containing protein. (745 aa)
	A0A0E0R8D2	Rab-GAP TBC domain-containing protein. (445 aa)
	A0A0E0R8R7	Uncharacterized protein. (432 aa)
	A0A0E0RAL9	Uncharacterized protein. (855 aa)
	A0A0E0RD86	Uncharacterized protein. (436 aa)
	A0A0E0REI8	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (464 aa)
	A0A0E0RF80	Uncharacterized protein. (345 aa)
	A0A0E0RI42	Uncharacterized protein. (886 aa)
	A0A0E0RIF2	DAO domain-containing protein. (385 aa)
	A0A0E0RJY5	Uncharacterized protein. (1234 aa)
	A0A0E0MQG9	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (416 aa)
	A0A0E0MS82	Fe2OG dioxygenase domain-containing protein. (433 aa)
	A0A0E0MT53	Uncharacterized protein. (1671 aa)
	A0A0E0MT54	PWWP domain-containing protein. (388 aa)
	A0A0E0MVF4	DAO domain-containing protein. (414 aa)
	A0A0E0MVN3	Dihydrolipoyl dehydrogenase. (503 aa)
	A0A0E0MVT4	Dihydrolipoyl dehydrogenase. (561 aa)
	A0A0E0MWW4	Fe2OG dioxygenase domain-containing protein. (404 aa)
	A0A0E0MX37	Uncharacterized protein. (1371 aa)
	A0A0E0MZ97	Protein kinase domain-containing protein. (944 aa)
	A0A0E0N056	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1022 aa)
	A0A0E0N327	Pre-SET domain-containing protein. (343 aa)
	A0A0E0N3X6	Uncharacterized protein. (736 aa)
	A0A0E0N5S1	PHD domain-containing protein. (716 aa)
	A0A0E0N6H9	Rab-GAP TBC domain-containing protein. (368 aa)
	A0A0E0N725	Uncharacterized protein. (693 aa)
	A0A0E0N816	Uncharacterized protein. (383 aa)
	A0A0E0NFF8	Lipoyl-binding domain-containing protein. (536 aa)
	A0A0E0NGB9	Uncharacterized protein. (2112 aa)
	A0A0E0NHN5	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (336 aa)
	A0A0E0NHN7	Uncharacterized protein. (189 aa)
	A0A0E0NHW9	Uncharacterized protein. (852 aa)
	A0A0E0NIG2	Glutaredoxin domain-containing protein. (131 aa)
	A0A0E0NIG8	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (491 aa)
	A0A0E0NJW8	Uncharacterized protein. (1629 aa)
	A0A0E0NKH2	Uncharacterized protein; Belongs to the aldehyde dehydrogenase family. (586 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MQG9	A0A0E0NFF8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Lipoyl-binding domain-containing protein.	0.913
A0A0E0MQG9	A0A0E0NIG3	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.742
A0A0E0MQG9	A0A0E0NIG8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.742
A0A0E0MQG9	A0A0E0NKH2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.	0.726
A0A0E0MQG9	A0A0E0NU48	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.929
A0A0E0MQG9	A0A0E0P8F6	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Lipoyl-binding domain-containing protein.	0.913
A0A0E0MQG9	A0A0E0PC54	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.742
A0A0E0MQG9	A0A0E0PW89	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.726
A0A0E0MQG9	A0A0E0QNK4	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.931
A0A0E0MQG9	A0A0E0QRY6	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.747
A0A0E0MQG9	A0A0E0R528	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.742
A0A0E0MQG9	A0A0E0REI8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.742
A0A0E0MS82	A0A0E0MT53	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.587
A0A0E0MS82	A0A0E0MT54	Fe2OG dioxygenase domain-containing protein.	PWWP domain-containing protein.	0.587
A0A0E0MS82	A0A0E0MX37	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.567
A0A0E0MS82	A0A0E0N056	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.587
A0A0E0MS82	A0A0E0N327	Fe2OG dioxygenase domain-containing protein.	Pre-SET domain-containing protein.	0.476
A0A0E0MS82	A0A0E0N3X6	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.476
A0A0E0MS82	A0A0E0N725	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.476
A0A0E0MS82	A0A0E0N816	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.750