83 items (Oryza rufipogon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0NN91	RPA_C domain-containing protein. (279 aa)
	A0A0E0MQD9	C2H2-type domain-containing protein. (334 aa)
	A0A0E0MR78	Uncharacterized protein. (214 aa)
	A0A0E0MS78	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1224 aa)
	A0A0E0MSU3	Uncharacterized protein. (557 aa)
	A0A0E0MTP8	Uncharacterized protein. (141 aa)
	A0A0E0MU22	Uncharacterized protein. (106 aa)
	A0A0E0MU23	Uncharacterized protein. (175 aa)
	A0A0E0MYN4	Uncharacterized protein. (291 aa)
	A0A0E0MYN5	Uncharacterized protein. (330 aa)
	A0A0E0MZW2	Uncharacterized protein. (192 aa)
	A0A0E0N0W6	Uncharacterized protein; Belongs to the ATP-dependent DNA ligase family. (1415 aa)
	A0A0E0N218	DNA_pol3_gamma3 domain-containing protein. (1022 aa)
	A0A0E0N2K1	Uncharacterized protein. (161 aa)
	A0A0E0N385	Uncharacterized protein. (801 aa)
	A0A0E0N7V1	DNA_mis_repair domain-containing protein. (720 aa)
	A0A0E0NEX1	Uncharacterized protein. (306 aa)
	A0A0E0NH59	Uncharacterized protein. (863 aa)
	A0A0E0NHY8	NAC domain-containing protein. (283 aa)
	A0A0E0NI64	Uncharacterized protein. (298 aa)
	A0A0E0NJU4	Uncharacterized protein. (729 aa)
	A0A0E0NJX6	C2H2-type domain-containing protein. (340 aa)
	A0A0E0NLL5	AAA domain-containing protein. (346 aa)
	A0A0E0NLM8	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (656 aa)
	A0A0E0NMF4	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
	A0A0E0NML9	NAC domain-containing protein. (331 aa)
	A0A0E0NNK7	NAC domain-containing protein. (297 aa)
	A0A0E0NP59	Uncharacterized protein. (447 aa)
	A0A0E0NRJ4	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (630 aa)
	A0A0E0NSS6	AAA domain-containing protein. (1233 aa)
	A0A0E0NYJ9	Uncharacterized protein. (311 aa)
	A0A0E0P2E5	AAA domain-containing protein. (353 aa)
	A0A0E0P437	Uncharacterized protein. (547 aa)
	A0A0E0P7U4	Uncharacterized protein. (95 aa)
	A0A0E0PBB9	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1196 aa)
	A0A0E0PBK5	NAC domain-containing protein. (278 aa)
	A0A0E0PCU4	AAA domain-containing protein. (344 aa)
	A0A0E0PE99	Exonuclease domain-containing protein. (260 aa)
	A0A0E0PFV1	Smr domain-containing protein. (919 aa)
	A0A0E0PG24	Protein kinase domain-containing protein. (278 aa)
	A0A0E0PGA7	Uncharacterized protein. (169 aa)
	A0A0E0PGK4	Uncharacterized protein. (193 aa)
	A0A0E0PJH2	Uncharacterized protein. (145 aa)
	A0A0E0PJZ0	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (942 aa)
	A0A0E0PP39	Uncharacterized protein. (636 aa)
	A0A0E0PPH3	DNA_MISMATCH_REPAIR_2 domain-containing protein. (686 aa)
	A0A0E0PPT0	Uncharacterized protein. (181 aa)
	A0A0E0PQ99	DNA_pol3_gamma3 domain-containing protein. (1083 aa)
	A0A0E0PSB2	NAC domain-containing protein. (683 aa)
	A0A0E0PSD0	Uncharacterized protein. (165 aa)
	A0A0E0Q208	Uncharacterized protein. (448 aa)
	A0A0E0Q8C0	Uncharacterized protein. (779 aa)
	A0A0E0Q8G7	Uncharacterized protein. (1139 aa)
	A0A0E0QBV2	Uncharacterized protein. (598 aa)
	A0A0E0QDQ7	AAA domain-containing protein. (733 aa)
	A0A0E0QEK5	NAC domain-containing protein. (729 aa)
	A0A0E0QEQ4	Uncharacterized protein. (151 aa)
	A0A0E0QIB7	Exonuclease domain-containing protein. (453 aa)
	A0A0E0QLD5	Uncharacterized protein. (353 aa)
	A0A0E0QLY3	Uncharacterized protein. (134 aa)
	A0A0E0QMP9	Uncharacterized protein. (175 aa)
	A0A0E0QR90	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1265 aa)
	A0A0E0QTY0	Uncharacterized protein. (131 aa)
	A0A0E0QUU2	MutL_C domain-containing protein. (1116 aa)
	A0A0E0QZ31	NAC domain-containing protein. (543 aa)
	A0A0E0R0E1	NAC domain-containing protein. (324 aa)
	A0A0E0R0P3	DNA ligase. (912 aa)
	A0A0E0R178	Uncharacterized protein. (821 aa)
	A0A0E0R2U2	Uncharacterized protein. (451 aa)
	A0A0E0R342	Uncharacterized protein. (436 aa)
	A0A0E0R531	DNA polymerase. (1082 aa)
	A0A0E0R5K4	DUF223 domain-containing protein. (362 aa)
	A0A0E0R6A8	DNA_pol3_gamma3 domain-containing protein. (1183 aa)
	A0A0E0R9X8	Replication factor C subunit 1. (987 aa)
	A0A0E0RAG3	Rep_fac-A_C domain-containing protein. (458 aa)
	A0A0E0RAN3	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (243 aa)
	A0A0E0RB58	Uncharacterized protein. (197 aa)
	A0A0E0RBX0	Uncharacterized protein. (101 aa)
	A0A0E0RC83	Rep_fac-A_C domain-containing protein. (296 aa)
	A0A0E0RF42	DNA_pol3_gamma3 domain-containing protein. (1174 aa)
	A0A0E0RG45	AAA domain-containing protein. (963 aa)
	A0A0E0RHQ7	Uncharacterized protein. (321 aa)
	A0A0E0RK65	Uncharacterized protein. (647 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MQD9	A0A0E0MZW2	C2H2-type domain-containing protein.	Uncharacterized protein.	0.474
A0A0E0MQD9	A0A0E0N218	C2H2-type domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.513
A0A0E0MQD9	A0A0E0NJU4	C2H2-type domain-containing protein.	Uncharacterized protein.	0.502
A0A0E0MQD9	A0A0E0NLL5	C2H2-type domain-containing protein.	AAA domain-containing protein.	0.496
A0A0E0MQD9	A0A0E0NMF4	C2H2-type domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.959
A0A0E0MQD9	A0A0E0NYJ9	C2H2-type domain-containing protein.	Uncharacterized protein.	0.474
A0A0E0MQD9	A0A0E0P2E5	C2H2-type domain-containing protein.	AAA domain-containing protein.	0.502
A0A0E0MQD9	A0A0E0P7U4	C2H2-type domain-containing protein.	Uncharacterized protein.	0.474
A0A0E0MQD9	A0A0E0PCU4	C2H2-type domain-containing protein.	AAA domain-containing protein.	0.496
A0A0E0MQD9	A0A0E0PPT0	C2H2-type domain-containing protein.	Uncharacterized protein.	0.474
A0A0E0MQD9	A0A0E0PQ99	C2H2-type domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.513
A0A0E0MQD9	A0A0E0Q8G7	C2H2-type domain-containing protein.	Uncharacterized protein.	0.775
A0A0E0MQD9	A0A0E0QDQ7	C2H2-type domain-containing protein.	AAA domain-containing protein.	0.496
A0A0E0MQD9	A0A0E0R2U2	C2H2-type domain-containing protein.	Uncharacterized protein.	0.502
A0A0E0MQD9	A0A0E0R6A8	C2H2-type domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.496
A0A0E0MQD9	A0A0E0RF42	C2H2-type domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.496
A0A0E0MQD9	A0A0E0RG45	C2H2-type domain-containing protein.	AAA domain-containing protein.	0.496
A0A0E0MQD9	A0A0E0RK65	C2H2-type domain-containing protein.	Uncharacterized protein.	0.775
A0A0E0MR78	A0A0E0MS78	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.672
A0A0E0MR78	A0A0E0N0W6	Uncharacterized protein.	Uncharacterized protein; Belongs to the ATP-dependent DNA ligase family.	0.707