(39 nodes) NOD-like receptor signaling pathway network (Oryza rufipogon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0MXH7	DUF642 domain-containing protein. (114 aa)
	A0A0E0MYN1	Uncharacterized protein. (275 aa)
	A0A0E0N1N1	Uncharacterized protein. (300 aa)
	A0A0E0N2F3	Uncharacterized protein. (684 aa)
	A0A0E0N2L8	DUF642 domain-containing protein. (206 aa)
	A0A0E0N2M2	DUF642 domain-containing protein. (78 aa)
	A0A0E0N2M3	DUF642 domain-containing protein. (98 aa)
	A0A0E0N433	MCU domain-containing protein. (305 aa)
	A0A0E0N7Z0	Thioredoxin domain-containing protein. (168 aa)
	A0A0E0NDK8	GB1/RHD3-type G domain-containing protein. (1081 aa)
	A0A0E0NDT5	RRM_8 domain-containing protein. (1042 aa)
	A0A0E0NES9	RRM_8 domain-containing protein. (747 aa)
	A0A0E0NIB1	Thioredoxin domain-containing protein. (225 aa)
	A0A0E0NK50	Peptidase_S15 domain-containing protein. (223 aa)
	A0A0E0NR44	Uncharacterized protein. (277 aa)
	A0A0E0NS24	MCU domain-containing protein. (350 aa)
	A0A0E0NS30	RBR-type E3 ubiquitin transferase. (593 aa)
	A0A0E0NYF8	RBR-type E3 ubiquitin transferase. (540 aa)
	A0A0E0NYG0	RBR-type E3 ubiquitin transferase. (1126 aa)
	A0A0E0P1D9	COR domain-containing protein. (1342 aa)
	A0A0E0P1T2	Uncharacterized protein. (455 aa)
	A0A0E0P4F5	Uncharacterized protein. (75 aa)
	A0A0E0P9A1	Thioredoxin domain-containing protein. (306 aa)
	A0A0E0PAX3	RBR-type E3 ubiquitin transferase. (578 aa)
	A0A0E0PBW7	Thioredoxin domain-containing protein. (180 aa)
	A0A0E0PFP8	Thioredoxin domain-containing protein. (180 aa)
	A0A0E0PM02	G domain-containing protein. (897 aa)
	A0A0E0PMN9	Uncharacterized protein. (116 aa)
	A0A0E0PQG7	Uncharacterized protein. (275 aa)
	A0A0E0PR85	GB1/RHD3-type G domain-containing protein. (1070 aa)
	A0A0E0PUJ7	Uncharacterized protein. (166 aa)
	A0A0E0QLV1	RBR-type E3 ubiquitin transferase. (607 aa)
	A0A0E0QTR1	RanBP2-type domain-containing protein. (518 aa)
	A0A0E0QV11	RBR-type E3 ubiquitin transferase. (526 aa)
	A0A0E0QV12	RBR-type E3 ubiquitin transferase. (598 aa)
	A0A0E0R108	MCU domain-containing protein. (348 aa)
	A0A0E0R3K3	MCU domain-containing protein. (171 aa)
	A0A0E0RD26	MCU domain-containing protein. (282 aa)
	A0A0E0REQ1	Thioredoxin domain-containing protein. (172 aa)

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0MXH7	A0A0E0N2M3	DUF642 domain-containing protein.	DUF642 domain-containing protein.	0.534
A0A0E0MXH7	A0A0E0PMN9	DUF642 domain-containing protein.	Uncharacterized protein.	0.528
A0A0E0MYN1	A0A0E0PM02	Uncharacterized protein.	G domain-containing protein.	0.753
A0A0E0N1N1	A0A0E0PM02	Uncharacterized protein.	G domain-containing protein.	0.753
A0A0E0N2L8	A0A0E0N2M3	DUF642 domain-containing protein.	DUF642 domain-containing protein.	0.538
A0A0E0N2L8	A0A0E0PMN9	DUF642 domain-containing protein.	Uncharacterized protein.	0.534
A0A0E0N2M3	A0A0E0MXH7	DUF642 domain-containing protein.	DUF642 domain-containing protein.	0.534
A0A0E0N2M3	A0A0E0N2L8	DUF642 domain-containing protein.	DUF642 domain-containing protein.	0.538
A0A0E0N2M3	A0A0E0PMN9	DUF642 domain-containing protein.	Uncharacterized protein.	0.545
A0A0E0NDK8	A0A0E0P1D9	GB1/RHD3-type G domain-containing protein.	COR domain-containing protein.	0.443
A0A0E0NDT5	A0A0E0PM02	RRM_8 domain-containing protein.	G domain-containing protein.	0.753
A0A0E0NES9	A0A0E0PM02	RRM_8 domain-containing protein.	G domain-containing protein.	0.753
A0A0E0NR44	A0A0E0PM02	Uncharacterized protein.	G domain-containing protein.	0.753
A0A0E0P1D9	A0A0E0NDK8	COR domain-containing protein.	GB1/RHD3-type G domain-containing protein.	0.443
A0A0E0P1D9	A0A0E0PR85	COR domain-containing protein.	GB1/RHD3-type G domain-containing protein.	0.443
A0A0E0P4F5	A0A0E0PM02	Uncharacterized protein.	G domain-containing protein.	0.753
A0A0E0PM02	A0A0E0MYN1	G domain-containing protein.	Uncharacterized protein.	0.753
A0A0E0PM02	A0A0E0N1N1	G domain-containing protein.	Uncharacterized protein.	0.753
A0A0E0PM02	A0A0E0NDT5	G domain-containing protein.	RRM_8 domain-containing protein.	0.753
A0A0E0PM02	A0A0E0NES9	G domain-containing protein.	RRM_8 domain-containing protein.	0.753