(23 nodes) Ubiquitin-associated domain network (Oryza brachyantha)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	J3KWX5_ORYBR	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (795 aa)
	J3KYM9_ORYBR	UBA domain-containing protein. (292 aa)
	J3L2Z7_ORYBR	DNA ligase. (1397 aa)
	J3L520_ORYBR	UBA domain-containing protein. (289 aa)
	J3L7D4_ORYBR	Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (195 aa)
	J3LA62_ORYBR	Uncharacterized protein. (370 aa)
	J3LA63_ORYBR	Uncharacterized protein. (369 aa)
	J3LAL4_ORYBR	Uncharacterized protein. (412 aa)
	J3LD29_ORYBR	UBA domain-containing protein. (458 aa)
	J3LDE0_ORYBR	Uncharacterized protein. (1030 aa)
	J3LED3_ORYBR	Uncharacterized protein. (893 aa)
	J3LJ60_ORYBR	Uncharacterized protein. (645 aa)
	J3LMR6_ORYBR	Non-specific serine/threonine protein kinase. (508 aa)
	J3LR80_ORYBR	UBA domain-containing protein. (433 aa)
	J3LYW5_ORYBR	Uncharacterized protein. (880 aa)
	J3M1Y5_ORYBR	Uncharacterized protein. (563 aa)
	J3M414_ORYBR	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (883 aa)
	J3M738_ORYBR	UBA domain-containing protein. (617 aa)
	J3M950_ORYBR	Non-specific serine/threonine protein kinase. (504 aa)
	J3MD28_ORYBR	Uncharacterized protein. (409 aa)
	J3MUL8_ORYBR	UBA domain-containing protein. (466 aa)
	J3MVV9_ORYBR	Uncharacterized protein. (3735 aa)
	J3ND35_ORYBR	Uncharacterized protein. (3641 aa)

Your Current Organism:

Oryza brachyantha

NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
J3KWX5_ORYBR	J3LA62_ORYBR	J3KWX5	J3LA62	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Uncharacterized protein.	0.760
J3KWX5_ORYBR	J3LA63_ORYBR	J3KWX5	J3LA63	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Uncharacterized protein.	0.760
J3KWX5_ORYBR	J3MD28_ORYBR	J3KWX5	J3MD28	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Uncharacterized protein.	0.760
J3L2Z7_ORYBR	J3LA62_ORYBR	J3L2Z7	J3LA62	DNA ligase.	Uncharacterized protein.	0.669
J3L2Z7_ORYBR	J3LA63_ORYBR	J3L2Z7	J3LA63	DNA ligase.	Uncharacterized protein.	0.669
J3L2Z7_ORYBR	J3LDE0_ORYBR	J3L2Z7	J3LDE0	DNA ligase.	Uncharacterized protein.	0.625
J3L2Z7_ORYBR	J3M414_ORYBR	J3L2Z7	J3M414	DNA ligase.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.566
J3L2Z7_ORYBR	J3MD28_ORYBR	J3L2Z7	J3MD28	DNA ligase.	Uncharacterized protein.	0.669
J3LA62_ORYBR	J3KWX5_ORYBR	J3LA62	J3KWX5	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	0.760
J3LA62_ORYBR	J3L2Z7_ORYBR	J3LA62	J3L2Z7	Uncharacterized protein.	DNA ligase.	0.669
J3LA62_ORYBR	J3LA63_ORYBR	J3LA62	J3LA63	Uncharacterized protein.	Uncharacterized protein.	0.900
J3LA62_ORYBR	J3LAL4_ORYBR	J3LA62	J3LAL4	Uncharacterized protein.	Uncharacterized protein.	0.775
J3LA62_ORYBR	J3LED3_ORYBR	J3LA62	J3LED3	Uncharacterized protein.	Uncharacterized protein.	0.943
J3LA62_ORYBR	J3LYW5_ORYBR	J3LA62	J3LYW5	Uncharacterized protein.	Uncharacterized protein.	0.943
J3LA62_ORYBR	J3M1Y5_ORYBR	J3LA62	J3M1Y5	Uncharacterized protein.	Uncharacterized protein.	0.632
J3LA62_ORYBR	J3MD28_ORYBR	J3LA62	J3MD28	Uncharacterized protein.	Uncharacterized protein.	0.903
J3LA63_ORYBR	J3KWX5_ORYBR	J3LA63	J3KWX5	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	0.760
J3LA63_ORYBR	J3L2Z7_ORYBR	J3LA63	J3L2Z7	Uncharacterized protein.	DNA ligase.	0.669
J3LA63_ORYBR	J3LA62_ORYBR	J3LA63	J3LA62	Uncharacterized protein.	Uncharacterized protein.	0.900
J3LA63_ORYBR	J3LAL4_ORYBR	J3LA63	J3LAL4	Uncharacterized protein.	Uncharacterized protein.	0.775