(19 nodes) Histidine kinase, and Helix_turn_helix, Lux Regulon network (Agromyces aureus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANJ25695.1	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
	ANJ25826.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	ANJ25934.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (490 aa)
	ANJ25935.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	ANJ26083.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (399 aa)
	ANJ26084.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	ANJ26136.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
	ANJ26137.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
	ANJ26138.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
	ANJ26317.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	ANJ26318.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (602 aa)
	ANJ26852.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
	ANJ28823.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
	ANJ27235.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	ANJ28875.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
	ANJ28936.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	ANJ27551.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (408 aa)
	ANJ27974.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	ANJ27975.1	ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (583 aa)

Your Current Organism:

Agromyces aureus

NCBI taxonomy Id: 453304
Other names: A. aureus, Agromyces aureus Corretto et al. 2016, Agromyces sp. AR33, DSM 101731, LMG 29235, LMG:29235, strain AR33

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANJ25695.1	ANJ25826.1	ATC03_01885	ATC03_02720	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
ANJ25695.1	ANJ25934.1	ATC03_01885	ATC03_03450	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.649
ANJ25695.1	ANJ26083.1	ATC03_01885	ATC03_04385	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.788
ANJ25695.1	ANJ26084.1	ATC03_01885	ATC03_04390	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
ANJ25695.1	ANJ26136.1	ATC03_01885	ATC03_04725	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
ANJ25695.1	ANJ26137.1	ATC03_01885	ATC03_04730	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.673
ANJ25695.1	ANJ26317.1	ATC03_01885	ATC03_05890	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
ANJ25695.1	ANJ26318.1	ATC03_01885	ATC03_05895	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.782
ANJ25695.1	ANJ27235.1	ATC03_01885	ATC03_11375	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
ANJ25695.1	ANJ27551.1	ATC03_01885	ATC03_13360	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.795
ANJ25695.1	ANJ27974.1	ATC03_01885	ATC03_15920	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.687
ANJ25695.1	ANJ27975.1	ATC03_01885	ATC03_15925	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.672
ANJ25695.1	ANJ28823.1	ATC03_01885	ATC03_09090	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
ANJ25826.1	ANJ25695.1	ATC03_02720	ATC03_01885	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
ANJ25826.1	ANJ25934.1	ATC03_02720	ATC03_03450	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.651
ANJ25826.1	ANJ26083.1	ATC03_02720	ATC03_04385	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.811
ANJ25826.1	ANJ26137.1	ATC03_02720	ATC03_04730	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.649
ANJ25826.1	ANJ26318.1	ATC03_02720	ATC03_05895	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.702
ANJ25826.1	ANJ27235.1	ATC03_02720	ATC03_11375	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
ANJ25826.1	ANJ27551.1	ATC03_02720	ATC03_13360	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.819