Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANJ25758.1 | ANJ25928.1 | ATC03_02235 | ATC03_03415 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| ANJ25758.1 | ANJ26195.1 | ATC03_02235 | ATC03_05090 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.933 |
| ANJ25758.1 | araA | ATC03_02235 | ATC03_02245 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.993 |
| ANJ25914.1 | ANJ26176.1 | ATC03_03315 | ATC03_04970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.753 |
| ANJ25914.1 | ANJ28732.1 | ATC03_03315 | ATC03_04960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.681 |
| ANJ25928.1 | ANJ25758.1 | ATC03_03415 | ATC03_02235 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| ANJ25928.1 | ANJ26195.1 | ATC03_03415 | ATC03_05090 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.933 |
| ANJ25928.1 | araA | ATC03_03415 | ATC03_02245 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.979 |
| ANJ25944.1 | ANJ27925.1 | ATC03_03515 | ATC03_15585 | 1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.661 |
| ANJ25944.1 | ANJ27926.1 | ATC03_03515 | ATC03_15590 | 1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Coagulation factor 5/8 type domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
| ANJ25944.1 | araA | ATC03_03515 | ATC03_02245 | 1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.430 |
| ANJ26001.1 | ANJ26176.1 | ATC03_03880 | ATC03_04970 | Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
| ANJ26001.1 | ANJ26250.1 | ATC03_03880 | ATC03_05460 | Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase family 6. | 0.469 |
| ANJ26176.1 | ANJ25914.1 | ATC03_04970 | ATC03_03315 | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.753 |
| ANJ26176.1 | ANJ26001.1 | ATC03_04970 | ATC03_03880 | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
| ANJ26176.1 | ANJ28732.1 | ATC03_04970 | ATC03_04960 | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
| ANJ26195.1 | ANJ25758.1 | ATC03_05090 | ATC03_02235 | Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.933 |
| ANJ26195.1 | ANJ25928.1 | ATC03_05090 | ATC03_03415 | Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.933 |
| ANJ26195.1 | araA | ATC03_05090 | ATC03_02245 | Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.578 |
| ANJ26195.1 | tpiA | ATC03_05090 | ATC03_09710 | Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.504 |
page 1 of 13