(33 nodes) Phox homology, and WASH complex network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g176880	Predicted protein. (522 aa)
	v1g196311	Predicted protein. (207 aa)
	v1g237996	Predicted protein. (632 aa)
	v1g197664	Predicted protein. (265 aa)
	v1g228135	Predicted protein. (523 aa)
	v1g85927	Predicted protein. (418 aa)
	v1g87802	Predicted protein. (363 aa)
	v1g161158	Sorting nexin; Involved in several stages of intracellular trafficking. (391 aa)
	v1g161846	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (768 aa)
	v1g91464	Predicted protein. (124 aa)
	v1g140538	Predicted protein. (169 aa)
	v1g182326	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (182 aa)
	v1g182990	Predicted protein. (1032 aa)
	v1g100430	Predicted protein. (502 aa)
	v1g229200	Predicted protein. (311 aa)
	v1g242858	Predicted protein. (448 aa)
	v1g105068	Predicted protein. (439 aa)
	v1g208117	Predicted protein. (330 aa)
	v1g244464	Predicted protein. (168 aa)
	v1g244990	Predicted protein. (327 aa)
	v1g230183	Predicted protein. (435 aa)
	v1g125486	Predicted protein. (145 aa)
	v1g246794	Predicted protein. (428 aa)
	v1g247042	Predicted protein. (426 aa)
	v1g131959	Predicted protein. (322 aa)
	v1g134716	Predicted protein. (391 aa)
	v1g137320	Predicted protein. (196 aa)
	v1g248225	Predicted protein. (131 aa)
	v1g220885	Predicted protein. (364 aa)
	v1g176303	Predicted protein. (683 aa)
	v1g146526	Predicted protein. (193 aa)
	v1g223994	Predicted protein. (220 aa)
	v1g225460	Predicted protein. (176 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g100430	v1g125486	A7S129	A7SNW9	Predicted protein.	Predicted protein.	0.678
v1g100430	v1g134716	A7S129	A7SW17	Predicted protein.	Predicted protein.	0.429
v1g100430	v1g146526	A7S129	A7T5B7	Predicted protein.	Predicted protein.	0.766
v1g100430	v1g161846	A7S129	A7RRD4	Predicted protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.766
v1g100430	v1g182326	A7S129	A7RV73	Predicted protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.850
v1g100430	v1g197664	A7S129	A7RIL9	Predicted protein.	Predicted protein.	0.678
v1g100430	v1g208117	A7S129	A7S7T4	Predicted protein.	Predicted protein.	0.591
v1g100430	v1g229200	A7S129	A7S1T2	Predicted protein.	Predicted protein.	0.770
v1g100430	v1g244464	A7S129	A7SD93	Predicted protein.	Predicted protein.	0.858
v1g100430	v1g244990	A7S129	A7SFV3	Predicted protein.	Predicted protein.	0.591
v1g105068	v1g140538	A7S567	A7RTN2	Predicted protein.	Predicted protein.	0.801
v1g105068	v1g176303	A7S567	A7T1T2	Predicted protein.	Predicted protein.	0.994
v1g105068	v1g182990	A7S567	A7RX82	Predicted protein.	Predicted protein.	0.943
v1g105068	v1g196311	A7S567	A7RF75	Predicted protein.	Predicted protein.	0.900
v1g105068	v1g242858	A7S567	A7S4U2	Predicted protein.	Predicted protein.	0.912
v1g105068	v1g248225	A7S567	A7SZK3	Predicted protein.	Predicted protein.	0.585
v1g105068	v1g85927	A7S567	A7RLS4	Predicted protein.	Predicted protein.	0.403
v1g125486	v1g100430	A7SNW9	A7S129	Predicted protein.	Predicted protein.	0.678
v1g125486	v1g146526	A7SNW9	A7T5B7	Predicted protein.	Predicted protein.	0.746
v1g125486	v1g161846	A7SNW9	A7RRD4	Predicted protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.746