(10 nodes) GPCR family 3, GABA-B receptor network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g86565	Predicted protein. (649 aa)
	v1g87697	Predicted protein. (688 aa)
	v1g239821	Predicted protein. (893 aa)
	v1g206093	Predicted protein; Belongs to the G-protein coupled receptor 3 family. (1272 aa)
	v1g244104	Predicted protein. (1015 aa)
	v1g210465	Predicted protein. (746 aa)
	v1g210496	Predicted protein. (615 aa)
	v1g40255	Predicted protein. (457 aa)
	v1g128892	Predicted protein. (103 aa)
	v1g223171	Predicted protein. (371 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g128892	v1g206093	A7SRK2	A7S379	Predicted protein.	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	0.543
v1g128892	v1g210465	A7SRK2	A7SD79	Predicted protein.	Predicted protein.	0.723
v1g128892	v1g210496	A7SRK2	A7SDA2	Predicted protein.	Predicted protein.	0.567
v1g128892	v1g223171	A7SRK2	A7T6W7	Predicted protein.	Predicted protein.	0.562
v1g128892	v1g239821	A7SRK2	A7RPP5	Predicted protein.	Predicted protein.	0.559
v1g128892	v1g244104	A7SRK2	A7SBD0	Predicted protein.	Predicted protein.	0.562
v1g128892	v1g40255	A7SRK2	A7SMA2	Predicted protein.	Predicted protein.	0.616
v1g128892	v1g86565	A7SRK2	A7RM77	Predicted protein.	Predicted protein.	0.565
v1g128892	v1g87697	A7SRK2	A7RNB3	Predicted protein.	Predicted protein.	0.562
v1g206093	v1g128892	A7S379	A7SRK2	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.543
v1g206093	v1g210465	A7S379	A7SD79	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.619
v1g206093	v1g210496	A7S379	A7SDA2	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.620
v1g206093	v1g223171	A7S379	A7T6W7	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.600
v1g206093	v1g239821	A7S379	A7RPP5	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.605
v1g206093	v1g244104	A7S379	A7SBD0	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.624
v1g206093	v1g40255	A7S379	A7SMA2	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.606
v1g206093	v1g86565	A7S379	A7RM77	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.601
v1g206093	v1g87697	A7S379	A7RNB3	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	Predicted protein.	0.606
v1g210465	v1g128892	A7SD79	A7SRK2	Predicted protein.	Predicted protein.	0.723
v1g210465	v1g206093	A7SD79	A7S379	Predicted protein.	Predicted protein; Belongs to the G-protein coupled receptor 3 family.	0.619