(14 nodes) Mixed, incl. Chromosome passenger complex, and Spindle elongation network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g238203	Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1108 aa)
	v1g82705	Predicted protein. (484 aa)
	v1g39421	Predicted protein. (112 aa)
	v1g95020	Predicted protein; Belongs to the protein kinase superfamily. (335 aa)
	v1g236741	Predicted protein. (385 aa)
	v1g114199	Predicted protein. (294 aa)
	v1g188880	Predicted protein; Belongs to the cyclin family. (299 aa)
	v1g237281	Predicted protein; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	v1g230469	Predicted protein; Belongs to the protein kinase superfamily. (314 aa)
	v1g214316	Predicted protein. (953 aa)
	v1g193454	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (879 aa)
	v1g247481	Predicted protein. (141 aa)
	v1g227597	Predicted protein. (288 aa)
	v1g194682	Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (577 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g114199	v1g188880	A7SDK2	A7SEI5	Predicted protein.	Predicted protein; Belongs to the cyclin family.	0.960
v1g114199	v1g193454	A7SDK2	A7STS0	Predicted protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.776
v1g114199	v1g194682	A7SDK2	A7SY31	Predicted protein.	Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.861
v1g114199	v1g214316	A7SDK2	A7SLX3	Predicted protein.	Predicted protein.	0.973
v1g114199	v1g227597	A7SDK2	A7SY18	Predicted protein.	Predicted protein.	0.903
v1g114199	v1g230469	A7SDK2	A7SLH0	Predicted protein.	Predicted protein; Belongs to the protein kinase superfamily.	0.705
v1g114199	v1g236741	A7SDK2	A7RY80	Predicted protein.	Predicted protein.	0.966
v1g114199	v1g237281	A7SDK2	A7SI65	Predicted protein.	Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.	0.959
v1g114199	v1g238203	A7SDK2	A7RH21	Predicted protein.	Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.966
v1g114199	v1g247481	A7SDK2	A7SUG7	Predicted protein.	Predicted protein.	0.975
v1g114199	v1g39421	A7SDK2	A7RQV0	Predicted protein.	Predicted protein.	0.911
v1g114199	v1g82705	A7SDK2	A7RIL7	Predicted protein.	Predicted protein.	0.907
v1g114199	v1g95020	A7SDK2	A7RVS7	Predicted protein.	Predicted protein; Belongs to the protein kinase superfamily.	0.967
v1g188880	v1g114199	A7SEI5	A7SDK2	Predicted protein; Belongs to the cyclin family.	Predicted protein.	0.960
v1g188880	v1g193454	A7SEI5	A7STS0	Predicted protein; Belongs to the cyclin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.823
v1g188880	v1g194682	A7SEI5	A7SY31	Predicted protein; Belongs to the cyclin family.	Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.892
v1g188880	v1g214316	A7SEI5	A7SLX3	Predicted protein; Belongs to the cyclin family.	Predicted protein.	0.966
v1g188880	v1g227597	A7SEI5	A7SY18	Predicted protein; Belongs to the cyclin family.	Predicted protein.	0.963
v1g188880	v1g230469	A7SEI5	A7SLH0	Predicted protein; Belongs to the cyclin family.	Predicted protein; Belongs to the protein kinase superfamily.	0.916
v1g188880	v1g236741	A7SEI5	A7RY80	Predicted protein; Belongs to the cyclin family.	Predicted protein.	0.915