STRINGSTRING
v1g238228 v1g238228 v1g82906 v1g82906 v1g67237 v1g67237 v1g180316 v1g180316 v1g203375 v1g203375 v1g241252 v1g241252 v1g96883 v1g96883 v1g101079 v1g101079 v1g166819 v1g166819 v1g167568 v1g167568 v1g229643 v1g229643 v1g237030 v1g237030 v1g244053 v1g244053 v1g244165 v1g244165 v1g115691 v1g115691 v1g245039 v1g245039 v1g117224 v1g117224 v1g118178 v1g118178 v1g189883 v1g189883 v1g190101 v1g190101 v1g119986 v1g119986 v1g127715 v1g127715 v1g193553 v1g193553 v1g132358 v1g132358 v1g247948 v1g247948 v1g175530 v1g175530 v1g175862 v1g175862 v1g147480 v1g147480 v1g155676 v1g155676
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
v1g238228Predicted protein. (542 aa)
v1g82906Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (65 aa)
v1g67237Predicted protein. (101 aa)
v1g180316Predicted protein. (735 aa)
v1g203375Predicted protein. (194 aa)
v1g241252Predicted protein. (306 aa)
v1g96883Predicted protein. (734 aa)
v1g101079General transcription factor IIH subunit. (400 aa)
v1g166819Predicted protein. (138 aa)
v1g167568Predicted protein; Belongs to the cyclin family. (306 aa)
v1g229643DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1929 aa)
v1g237030DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
v1g244053Predicted protein. (172 aa)
v1g244165General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (471 aa)
v1g115691Predicted protein. (421 aa)
v1g245039Predicted protein. (190 aa)
v1g117224Predicted protein. (117 aa)
v1g118178Predicted protein. (310 aa)
v1g189883DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
v1g190101Predicted protein. (274 aa)
v1g119986Predicted protein. (249 aa)
v1g127715Predicted protein. (71 aa)
v1g193553Predicted protein. (300 aa)
v1g132358Predicted protein. (60 aa)
v1g247948DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (129 aa)
v1g175530Predicted protein. (71 aa)
v1g175862Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (288 aa)
v1g147480Predicted protein. (93 aa)
v1g155676Predicted protein. (109 aa)
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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