STRINGSTRING
v1g238228 v1g238228 v1g180316 v1g180316 v1g241252 v1g241252 v1g101079 v1g101079 v1g167568 v1g167568 v1g244165 v1g244165 v1g115691 v1g115691 v1g245039 v1g245039 v1g175862 v1g175862 v1g155676 v1g155676
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
v1g238228Predicted protein. (542 aa)
v1g180316Predicted protein. (735 aa)
v1g241252Predicted protein. (306 aa)
v1g101079General transcription factor IIH subunit. (400 aa)
v1g167568Predicted protein; Belongs to the cyclin family. (306 aa)
v1g244165General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (471 aa)
v1g115691Predicted protein. (421 aa)
v1g245039Predicted protein. (190 aa)
v1g175862Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (288 aa)
v1g155676Predicted protein. (109 aa)
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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