(20 nodes) Mixed, incl. Synaptonemal complex, and Leucine zipper with capping helix domain network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g197451	Predicted protein. (199 aa)
	v1g198861	Predicted protein. (534 aa)
	v1g179665	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (205 aa)
	v1g239453	Predicted protein. (697 aa)
	v1g200701	Predicted protein. (395 aa)
	v1g162587	Predicted protein. (511 aa)
	v1g35540	Predicted protein. (186 aa)
	v1g241122	Predicted protein. (1235 aa)
	v1g203170	Predicted protein. (405 aa)
	v1g98776	Predicted protein. (176 aa)
	v1g204477	Predicted protein. (191 aa)
	v1g242484	Predicted protein. (358 aa)
	v1g209811	Predicted protein. (697 aa)
	v1g244357	Predicted protein. (376 aa)
	v1g233079	Predicted protein. (228 aa)
	v1g212981	Predicted protein. (355 aa)
	v1g215881	Predicted protein. (361 aa)
	v1g216292	Predicted protein. (2466 aa)
	v1g130070	Predicted protein. (152 aa)
	v1g247286	Predicted protein. (203 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g130070	v1g198861	A7SSM0	A7RLI6	Predicted protein.	Predicted protein.	0.638
v1g130070	v1g200701	A7SSM0	A7RQR5	Predicted protein.	Predicted protein.	0.413
v1g130070	v1g203170	A7SSM0	A7RWG7	Predicted protein.	Predicted protein.	0.609
v1g130070	v1g209811	A7SSM0	A7SBQ5	Predicted protein.	Predicted protein.	0.597
v1g162587	v1g233079	A7RTS5	A7SEE8	Predicted protein.	Predicted protein.	0.518
v1g162587	v1g98776	A7RTS5	A7RZG2	Predicted protein.	Predicted protein.	0.960
v1g179665	v1g197451	A7RM78	A7RI40	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	Predicted protein.	0.998
v1g179665	v1g198861	A7RM78	A7RLI6	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	Predicted protein.	0.710
v1g179665	v1g203170	A7RM78	A7RWG7	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	Predicted protein.	0.721
v1g197451	v1g179665	A7RI40	A7RM78	Predicted protein.	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	0.998
v1g197451	v1g198861	A7RI40	A7RLI6	Predicted protein.	Predicted protein.	0.639
v1g197451	v1g203170	A7RI40	A7RWG7	Predicted protein.	Predicted protein.	0.687
v1g197451	v1g244357	A7RI40	A7SCS5	Predicted protein.	Predicted protein.	0.518
v1g198861	v1g130070	A7RLI6	A7SSM0	Predicted protein.	Predicted protein.	0.638
v1g198861	v1g179665	A7RLI6	A7RM78	Predicted protein.	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	0.710
v1g198861	v1g197451	A7RLI6	A7RI40	Predicted protein.	Predicted protein.	0.639
v1g198861	v1g200701	A7RLI6	A7RQR5	Predicted protein.	Predicted protein.	0.639
v1g198861	v1g203170	A7RLI6	A7RWG7	Predicted protein.	Predicted protein.	0.707
v1g198861	v1g209811	A7RLI6	A7SBQ5	Predicted protein.	Predicted protein.	0.679
v1g198861	v1g241122	A7RLI6	A7RW76	Predicted protein.	Predicted protein.	0.639