24 items (Nematostella vectensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g197956	Predicted protein. (193 aa)
	v1g225715	Predicted protein. (135 aa)
	v1g224761	Predicted protein. (218 aa)
	v1g7672	Predicted protein. (121 aa)
	v1g146211	Predicted protein. (57 aa)
	v1g139976	Predicted protein. (106 aa)
	v1g175862	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (288 aa)
	v1g138459	Predicted protein. (108 aa)
	v1g133899	Predicted protein. (130 aa)
	v1g10142	Predicted protein. (997 aa)
	v1g217267	Predicted protein. (174 aa)
	v1g246040	Predicted protein. (255 aa)
	v1g212490	Predicted protein. (969 aa)
	v1g245039	Predicted protein. (190 aa)
	v1g115691	Predicted protein. (421 aa)
	v1g244165	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (471 aa)
	v1g166645	Predicted protein. (124 aa)
	v1g93714	Predicted protein. (116 aa)
	v1g240727	Predicted protein. (255 aa)
	v1g162513	Predicted protein. (662 aa)
	v1g90512	Predicted protein. (160 aa)
	v1g180316	Predicted protein. (735 aa)
	v1g178700	Predicted protein. (931 aa)
	v1g83420	Predicted protein. (375 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g10142	v1g115691	A7STW0	A7SES2	Predicted protein.	Predicted protein.	0.802
v1g10142	v1g133899	A7STW0	A7SVA3	Predicted protein.	Predicted protein.	0.938
v1g10142	v1g138459	A7STW0	A7SYY0	Predicted protein.	Predicted protein.	0.989
v1g10142	v1g139976	A7STW0	A7T062	Predicted protein.	Predicted protein.	0.963
v1g10142	v1g146211	A7STW0	A7T515	Predicted protein.	Predicted protein.	0.963
v1g10142	v1g162513	A7STW0	A7RTJ4	Predicted protein.	Predicted protein.	0.989
v1g10142	v1g166645	A7STW0	A7S5E5	Predicted protein.	Predicted protein.	0.989
v1g10142	v1g175862	A7STW0	A7SZU7	Predicted protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.794
v1g10142	v1g178700	A7STW0	A7RJC0	Predicted protein.	Predicted protein.	0.946
v1g10142	v1g180316	A7STW0	A7RNX6	Predicted protein.	Predicted protein.	0.763
v1g10142	v1g197956	A7STW0	A7RJB7	Predicted protein.	Predicted protein.	0.925
v1g10142	v1g212490	A7STW0	A7SHT6	Predicted protein.	Predicted protein.	0.989
v1g10142	v1g217267	A7STW0	A7STJ2	Predicted protein.	Predicted protein.	0.946
v1g10142	v1g224761	A7STW0	A7TB73	Predicted protein.	Predicted protein.	0.543
v1g10142	v1g225715	A7STW0	A8DVI6	Predicted protein.	Predicted protein.	0.940
v1g10142	v1g240727	A7STW0	A7RU65	Predicted protein.	Predicted protein.	0.974
v1g10142	v1g244165	A7STW0	A7SBP9	Predicted protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.761
v1g10142	v1g245039	A7STW0	A7SG25	Predicted protein.	Predicted protein.	0.894
v1g10142	v1g246040	A7STW0	A7SLJ3	Predicted protein.	Predicted protein.	0.989
v1g10142	v1g7672	A7STW0	A7T6V4	Predicted protein.	Predicted protein.	0.938