STRINGSTRING
v1g212490 v1g212490 v1g155676 v1g155676 v1g224761 v1g224761 v1g7672 v1g7672 v1g146211 v1g146211 v1g139976 v1g139976 v1g175862 v1g175862 v1g138459 v1g138459 v1g247948 v1g247948 v1g133899 v1g133899 v1g10142 v1g10142 v1g217267 v1g217267 v1g127715 v1g127715 v1g246040 v1g246040 v1g119986 v1g119986 v1g225715 v1g225715 v1g118178 v1g118178 v1g115691 v1g115691 v1g244053 v1g244053 v1g167568 v1g167568 v1g166819 v1g166819 v1g96883 v1g96883 v1g241356 v1g241356 v1g93714 v1g93714 v1g240727 v1g240727 v1g162513 v1g162513 v1g67237 v1g67237 v1g178700 v1g178700 v1g197956 v1g197956 v1g83420 v1g83420 v1g82906 v1g82906 v1g82479 v1g82479
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
v1g212490Predicted protein. (969 aa)
v1g155676Predicted protein. (109 aa)
v1g224761Predicted protein. (218 aa)
v1g7672Predicted protein. (121 aa)
v1g146211Predicted protein. (57 aa)
v1g139976Predicted protein. (106 aa)
v1g175862Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (288 aa)
v1g138459Predicted protein. (108 aa)
v1g247948DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (129 aa)
v1g133899Predicted protein. (130 aa)
v1g10142Predicted protein. (997 aa)
v1g217267Predicted protein. (174 aa)
v1g127715Predicted protein. (71 aa)
v1g246040Predicted protein. (255 aa)
v1g119986Predicted protein. (249 aa)
v1g225715Predicted protein. (135 aa)
v1g118178Predicted protein. (310 aa)
v1g115691Predicted protein. (421 aa)
v1g244053Predicted protein. (172 aa)
v1g167568Predicted protein; Belongs to the cyclin family. (306 aa)
v1g166819Predicted protein. (138 aa)
v1g96883Predicted protein. (734 aa)
v1g241356Predicted protein. (231 aa)
v1g93714Predicted protein. (116 aa)
v1g240727Predicted protein. (255 aa)
v1g162513Predicted protein. (662 aa)
v1g67237Predicted protein. (101 aa)
v1g178700Predicted protein. (931 aa)
v1g197956Predicted protein. (193 aa)
v1g83420Predicted protein. (375 aa)
v1g82906Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (65 aa)
v1g82479Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (177 aa)
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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