(14 nodes) Ribonuclease P complex network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g205577	Predicted protein. (271 aa)
	v1g163220	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)
	v1g163219	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)
	v1g237929	Predicted protein. (552 aa)
	v1g198581	Predicted protein. (123 aa)
	v1g180858	Predicted protein. (194 aa)
	v1g236602	Predicted protein. (128 aa)
	v1g240928	Predicted protein. (181 aa)
	v1g222887	Predicted protein. (107 aa)
	v1g195753	Predicted protein. (148 aa)
	v1g118883	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (184 aa)
	v1g168328	Predicted protein. (824 aa)
	v1g209074	Predicted protein. (321 aa)
	v1g243573	Predicted protein. (465 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g118883	v1g168328	A7SHU0	A7SAE7	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.984
v1g118883	v1g195753	A7SHU0	A7T4E5	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.999
v1g118883	v1g198581	A7SHU0	A7RKV5	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.995
v1g118883	v1g205577	A7SHU0	A7S216	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.999
v1g118883	v1g209074	A7SHU0	A7SA20	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.984
v1g118883	v1g222887	A7SHU0	A7T670	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.984
v1g118883	v1g236602	A7SHU0	A7RSJ0	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.901
v1g118883	v1g237929	A7SHU0	A7RFT7	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.584
v1g118883	v1g240928	A7SHU0	A7RV92	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.996
v1g118883	v1g243573	A7SHU0	A7S8I1	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Predicted protein.	0.998
v1g163219	v1g163220	A7RVM1	A7RVM2	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.902
v1g163219	v1g180858	A7RVM1	A7RQK9	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Predicted protein.	0.969
v1g163219	v1g237929	A7RVM1	A7RFT7	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Predicted protein.	0.948
v1g163220	v1g163219	A7RVM2	A7RVM1	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.902
v1g163220	v1g180858	A7RVM2	A7RQK9	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Predicted protein.	0.969
v1g163220	v1g237929	A7RVM2	A7RFT7	Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Predicted protein.	0.948
v1g168328	v1g118883	A7SAE7	A7SHU0	Predicted protein.	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.984
v1g168328	v1g195753	A7SAE7	A7T4E5	Predicted protein.	Predicted protein.	0.982
v1g168328	v1g198581	A7SAE7	A7RKV5	Predicted protein.	Predicted protein.	0.909
v1g168328	v1g205577	A7SAE7	A7S216	Predicted protein.	Predicted protein.	0.983