(31 nodes) Transmembrane transporter binding network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g206855	Predicted protein. (896 aa)
	v1g72810	Predicted protein. (188 aa)
	v1g208776	Predicted protein. (134 aa)
	v1g207805	Ubiquitin carboxyl-terminal hydrolase. (412 aa)
	v1g220528	Predicted protein. (223 aa)
	v1g139164	Predicted protein. (123 aa)
	v1g225830	Predicted protein. (157 aa)
	v1g203955	Predicted protein. (244 aa)
	v1g99855	Predicted protein. (114 aa)
	v1g99757	Predicted protein. (164 aa)
	v1g103179	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (113 aa)
	v1g29773	Predicted protein. (67 aa)
	v1g196260	Predicted protein. (188 aa)
	v1g196942	Predicted protein. (2788 aa)
	v1g238150	Predicted protein. (214 aa)
	v1g238907	Predicted protein. (877 aa)
	v1g239324	Predicted protein. (259 aa)
	v1g88882	Predicted protein. (376 aa)
	v1g92292	Predicted protein. (70 aa)
	v1g33780	Predicted protein. (289 aa)
	v1g92223	Predicted protein. (437 aa)
	v1g232294	Predicted protein. (214 aa)
	v1g203240	Predicted protein. (380 aa)
	v1g224737	Predicted protein. (143 aa)
	v1g223403	Predicted protein. (486 aa)
	v1g148728	Predicted protein. (109 aa)
	v1g147531	Predicted protein. (159 aa)
	v1g222564	Predicted protein. (204 aa)
	v1g52098	Predicted protein. (264 aa)
	v1g129920	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (134 aa)
	v1g128421	Predicted protein. (121 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g103179	v1g129920	A7S3K1	A7SSH5	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.901
v1g129920	v1g103179	A7SSH5	A7S3K1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.901
v1g196942	v1g238150	A7RGU1	A7RGU3	Predicted protein.	Predicted protein.	0.942
v1g220528	v1g99757	A7T0N7	A7S0C7	Predicted protein.	Predicted protein.	0.451
v1g220528	v1g99855	A7T0N7	A7S0C6	Predicted protein.	Predicted protein.	0.451
v1g223403	v1g224737	A7T7K1	A7TB43	Predicted protein.	Predicted protein.	0.483
v1g223403	v1g238150	A7T7K1	A7RGU3	Predicted protein.	Predicted protein.	0.939
v1g224737	v1g223403	A7TB43	A7T7K1	Predicted protein.	Predicted protein.	0.483
v1g238150	v1g196942	A7RGU3	A7RGU1	Predicted protein.	Predicted protein.	0.942
v1g238150	v1g223403	A7RGU3	A7T7K1	Predicted protein.	Predicted protein.	0.939
v1g99757	v1g220528	A7S0C7	A7T0N7	Predicted protein.	Predicted protein.	0.451
v1g99855	v1g220528	A7S0C6	A7T0N7	Predicted protein.	Predicted protein.	0.451