(28 nodes) Positive regulation of DNA recombination network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g248421	Predicted protein. (165 aa)
	v1g4909	Predicted protein. (152 aa)
	v1g248724	Predicted protein. (902 aa)
	v1g223233	Predicted protein. (239 aa)
	v1g248799	Predicted protein. (472 aa)
	v1g151150	Predicted protein. (130 aa)
	v1g131152	Predicted protein. (232 aa)
	v1g139985	Predicted protein. (232 aa)
	v1g238416	Enhancer of polycomb-like protein. (704 aa)
	v1g131109	Predicted protein. (224 aa)
	v1g128182	Predicted protein. (232 aa)
	v1g128116	Predicted protein. (232 aa)
	v1g128074	Predicted protein. (224 aa)
	v1g246110	Predicted protein. (1820 aa)
	v1g120763	Predicted protein. (240 aa)
	v1g212030	Predicted protein. (897 aa)
	v1g211357	Predicted protein. (344 aa)
	v1g244659	Predicted protein. (2095 aa)
	v1g113856	Predicted protein. (540 aa)
	v1g244209	Predicted protein. (685 aa)
	v1g42971	Predicted protein. (208 aa)
	v1g108790	Predicted protein. (373 aa)
	v1g107461	Predicted protein. (151 aa)
	v1g207143	Predicted protein. (692 aa)
	v1g98333	Predicted protein. (269 aa)
	v1g201344	Predicted protein. (1498 aa)
	v1g75062	Predicted protein. (105 aa)
	v1g180316	Predicted protein. (735 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g107461	v1g238416	A7S7D7	A7RI01	Predicted protein.	Enhancer of polycomb-like protein.	0.694
v1g107461	v1g248421	A7S7D7	A7T0Z8	Predicted protein.	Predicted protein.	0.969
v1g108790	v1g180316	A7S8H7	A7RNX6	Predicted protein.	Predicted protein.	0.528
v1g120763	v1g211357	A7SJP6	A7SF83	Predicted protein.	Predicted protein.	0.435
v1g180316	v1g108790	A7RNX6	A7S8H7	Predicted protein.	Predicted protein.	0.528
v1g180316	v1g212030	A7RNX6	A7SGP8	Predicted protein.	Predicted protein.	0.975
v1g180316	v1g244659	A7RNX6	A7SEA4	Predicted protein.	Predicted protein.	0.478
v1g180316	v1g246110	A7RNX6	A7SLZ0	Predicted protein.	Predicted protein.	0.437
v1g180316	v1g248724	A7RNX6	A7T529	Predicted protein.	Predicted protein.	0.478
v1g211357	v1g120763	A7SF83	A7SJP6	Predicted protein.	Predicted protein.	0.435
v1g212030	v1g180316	A7SGP8	A7RNX6	Predicted protein.	Predicted protein.	0.975
v1g238416	v1g107461	A7RI01	A7S7D7	Enhancer of polycomb-like protein.	Predicted protein.	0.694
v1g238416	v1g248421	A7RI01	A7T0Z8	Enhancer of polycomb-like protein.	Predicted protein.	0.990
v1g244659	v1g180316	A7SEA4	A7RNX6	Predicted protein.	Predicted protein.	0.478
v1g246110	v1g180316	A7SLZ0	A7RNX6	Predicted protein.	Predicted protein.	0.437
v1g248421	v1g107461	A7T0Z8	A7S7D7	Predicted protein.	Predicted protein.	0.969
v1g248421	v1g238416	A7T0Z8	A7RI01	Predicted protein.	Enhancer of polycomb-like protein.	0.990
v1g248724	v1g180316	A7T529	A7RNX6	Predicted protein.	Predicted protein.	0.478