(44 nodes) Reproductive structure development network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g217427	Predicted protein. (725 aa)
	v1g174250	Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (398 aa)
	v1g128689	Predicted protein. (87 aa)
	v1g216231	Predicted protein. (315 aa)
	v1g246645	Predicted protein. (426 aa)
	v1g224630	Predicted protein. (115 aa)
	v1g224628	Predicted protein. (128 aa)
	v1g223981	Predicted protein. (116 aa)
	v1g148857	Predicted protein. (221 aa)
	v1g146476	Predicted protein. (88 aa)
	v1g143195	Predicted protein. (66 aa)
	v1g176307	Predicted protein. (66 aa)
	v1g220345	Predicted protein. (715 aa)
	v1g194892	Predicted protein. (435 aa)
	v1g218450	Predicted protein. (366 aa)
	v1g247758	Predicted protein. (542 aa)
	v1g218118	Predicted protein. (449 aa)
	v1g123477	Predicted protein. (431 aa)
	v1g246161	Predicted protein. (1308 aa)
	v1g19039	Predicted protein. (63 aa)
	v1g214346	Predicted protein. (916 aa)
	v1g118591	Predicted protein. (105 aa)
	v1g115283	Predicted protein; Belongs to the tumor necrosis factor family. (124 aa)
	v1g114579	Predicted protein. (82 aa)
	v1g169376	Predicted protein. (137 aa)
	v1g209811	Predicted protein. (697 aa)
	v1g208963	Predicted protein. (1438 aa)
	v1g243738	Predicted protein. (636 aa)
	v1g107937	Predicted protein. (240 aa)
	v1g186169	Predicted protein. (99 aa)
	v1g185829	Predicted protein. (294 aa)
	v1g104199	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (387 aa)
	v1g104343	Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (267 aa)
	v1g100129	Predicted protein. (106 aa)
	v1g241026	Predicted protein. (1527 aa)
	v1g94894	Predicted protein. (814 aa)
	v1g162319	Predicted protein. (261 aa)
	v1g240139	Predicted protein. (366 aa)
	v1g200866	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (299 aa)
	v1g88429	Predicted protein. (658 aa)
	v1g87403	Predicted protein; Belongs to the G-protein coupled receptor 1 family. (297 aa)
	v1g160160	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (689 aa)
	v1g196615	Predicted protein. (220 aa)
	v1g196260	Predicted protein. (188 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g100129	v1g196260	A7S0T4	A7RF38	Predicted protein.	Predicted protein.	0.988
v1g104199	v1g148857	A7S4E9	A7T7G6	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Predicted protein.	0.406
v1g104199	v1g194892	A7S4E9	A7SZ10	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Predicted protein.	0.968
v1g104199	v1g218118	A7S4E9	A7SVJ0	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Predicted protein.	0.406
v1g104199	v1g88429	A7S4E9	A7RP11	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Predicted protein.	0.406
v1g104343	v1g128689	A7S4E3	A7SRC1	Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Predicted protein.	0.890
v1g104343	v1g216231	A7S4E3	A7SRB9	Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Predicted protein.	0.890
v1g104343	v1g247758	A7S4E3	A7SW78	Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Predicted protein.	0.890
v1g114579	v1g169376	A7SDQ6	A7SDQ5	Predicted protein.	Predicted protein.	0.667
v1g114579	v1g241026	A7SDQ6	A7RVR7	Predicted protein.	Predicted protein.	0.679
v1g114579	v1g94894	A7SDQ6	A7RVR6	Predicted protein.	Predicted protein.	0.679
v1g123477	v1g246161	A7SM95	A7SM94	Predicted protein.	Predicted protein.	0.943
v1g128689	v1g104343	A7SRC1	A7S4E3	Predicted protein.	Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.890
v1g128689	v1g174250	A7SRC1	A7STS2	Predicted protein.	Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.890
v1g128689	v1g216231	A7SRC1	A7SRB9	Predicted protein.	Predicted protein.	0.660
v1g128689	v1g247758	A7SRC1	A7SW78	Predicted protein.	Predicted protein.	0.543
v1g146476	v1g209811	A7T5A2	A7SBQ5	Predicted protein.	Predicted protein.	0.569
v1g146476	v1g214346	A7T5A2	A7SM04	Predicted protein.	Predicted protein.	0.730
v1g148857	v1g104199	A7T7G6	A7S4E9	Predicted protein.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.406
v1g148857	v1g160160	A7T7G6	A7RLJ0	Predicted protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.616