(52 nodes) Apoptotic signaling pathway network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g204128	Predicted protein. (1151 aa)
	v1g100129	Predicted protein. (106 aa)
	v1g205033	Predicted protein. (503 aa)
	v1g100278	Predicted protein. (142 aa)
	v1g100372	Predicted protein. (203 aa)
	v1g165971	PRA1 family protein. (186 aa)
	v1g104131	Predicted protein. (199 aa)
	v1g243341	Predicted protein. (287 aa)
	v1g108313	Predicted protein. (123 aa)
	v1g110116	Predicted protein; Belongs to the peptidase C14A family. (262 aa)
	v1g208969	Predicted protein. (163 aa)
	v1g209600	Sortilin. (1176 aa)
	v1g64649	Predicted protein. (197 aa)
	v1g113475	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (581 aa)
	v1g188431	Predicted protein. (792 aa)
	v1g114761	Predicted protein. (61 aa)
	v1g244659	Predicted protein. (2095 aa)
	v1g244968	Predicted protein. (180 aa)
	v1g171012	Predicted protein; Belongs to the PI3/PI4-kinase family. (1722 aa)
	v1g172697	Predicted protein. (304 aa)
	v1g125844	Predicted protein; Belongs to the peptidase C14A family. (242 aa)
	v1g246637	Predicted protein. (188 aa)
	v1g126386	Predicted protein; Belongs to the PI3/PI4-kinase family. (1860 aa)
	v1g126375	Predicted protein. (597 aa)
	v1g126379	Predicted protein. (1495 aa)
	v1g215615	Predicted protein. (141 aa)
	v1g11324	Predicted protein. (411 aa)
	v1g128814	Predicted protein. (105 aa)
	v1g56831	Predicted protein. (114 aa)
	v1g175004	Predicted protein. (161 aa)
	v1g14027	Predicted protein. (235 aa)
	v1g12104	Predicted protein. (408 aa)
	v1g135550	Predicted protein. (422 aa)
	v1g136467	Predicted protein. (306 aa)
	v1g139409	Predicted protein. (101 aa)
	v1g139439	Predicted protein. (158 aa)
	v1g176307	Predicted protein. (66 aa)
	v1g144000	Predicted protein. (90 aa)
	v1g144500	Predicted protein. (88 aa)
	v1g248724	Predicted protein. (902 aa)
	v1g224004	Predicted protein. (273 aa)
	v1g241439	Predicted protein. (263 aa)
	v1g93936	Predicted protein. (924 aa)
	v1g93171	Predicted protein. (333 aa)
	v1g37807	Predicted protein. (106 aa)
	v1g232392	Predicted protein. (144 aa)
	v1g158977	Predicted protein. (1023 aa)
	v1g82268	Predicted protein. (52 aa)
	v1g158326	Predicted protein. (327 aa)
	v1g196260	Predicted protein. (188 aa)
	v1g160179	Predicted protein. (1217 aa)
	v1g225594	Predicted protein. (109 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g100129	v1g100278	A7S0T4	A7S109	Predicted protein.	Predicted protein.	0.958
v1g100129	v1g125844	A7S0T4	A7SPA7	Predicted protein.	Predicted protein; Belongs to the peptidase C14A family.	0.471
v1g100129	v1g128814	A7S0T4	A7SRF5	Predicted protein.	Predicted protein.	0.955
v1g100129	v1g160179	A7S0T4	A7RLM8	Predicted protein.	Predicted protein.	0.725
v1g100129	v1g196260	A7S0T4	A7RF38	Predicted protein.	Predicted protein.	0.988
v1g100129	v1g208969	A7S0T4	A7S9S4	Predicted protein.	Predicted protein.	0.959
v1g100129	v1g244968	A7S0T4	A7SFS9	Predicted protein.	Predicted protein.	0.958
v1g100129	v1g246637	A7S0T4	A7SPR2	Predicted protein.	Predicted protein.	0.601
v1g100278	v1g100129	A7S109	A7S0T4	Predicted protein.	Predicted protein.	0.958
v1g100278	v1g160179	A7S109	A7RLM8	Predicted protein.	Predicted protein.	0.493
v1g100278	v1g196260	A7S109	A7RF38	Predicted protein.	Predicted protein.	0.979
v1g100372	v1g160179	A7S162	A7RLM8	Predicted protein.	Predicted protein.	0.456
v1g100372	v1g171012	A7S162	A7SIS1	Predicted protein.	Predicted protein; Belongs to the PI3/PI4-kinase family.	0.729
v1g100372	v1g225594	A7S162	A8DVB6	Predicted protein.	Predicted protein.	0.729
v1g104131	v1g160179	A7S4C8	A7RLM8	Predicted protein.	Predicted protein.	0.456
v1g104131	v1g171012	A7S4C8	A7SIS1	Predicted protein.	Predicted protein; Belongs to the PI3/PI4-kinase family.	0.729
v1g104131	v1g225594	A7S4C8	A8DVB6	Predicted protein.	Predicted protein.	0.729
v1g110116	v1g160179	A7S9L1	A7RLM8	Predicted protein; Belongs to the peptidase C14A family.	Predicted protein.	0.813
v1g113475	v1g158977	A7SCK4	A7RI59	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Predicted protein.	0.431
v1g125844	v1g100129	A7SPA7	A7S0T4	Predicted protein; Belongs to the peptidase C14A family.	Predicted protein.	0.471