(63 nodes) Positive regulation of response to DNA damage stimulus network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g238634	Predicted protein. (1429 aa)
	v1g176677	Predicted protein. (244 aa)
	v1g59717	Predicted protein. (72 aa)
	v1g151150	Predicted protein. (130 aa)
	v1g248799	Predicted protein. (472 aa)
	v1g2855	Predicted protein. (169 aa)
	v1g223233	Predicted protein. (239 aa)
	v1g144000	Predicted protein. (90 aa)
	v1g248561	Predicted protein. (1020 aa)
	v1g248421	Predicted protein. (165 aa)
	v1g139985	Predicted protein. (232 aa)
	v1g218821	Predicted protein. (266 aa)
	v1g218026	Predicted protein. (516 aa)
	v1g132285	Predicted protein. (79 aa)
	v1g174383	Predicted protein. (370 aa)
	v1g131152	Predicted protein. (232 aa)
	v1g131109	Predicted protein. (224 aa)
	v1g130205	Predicted protein. (326 aa)
	v1g128182	Predicted protein. (232 aa)
	v1g128116	Predicted protein. (232 aa)
	v1g128074	Predicted protein. (224 aa)
	v1g126379	Predicted protein. (1495 aa)
	v1g126375	Predicted protein. (597 aa)
	v1g126386	Predicted protein; Belongs to the PI3/PI4-kinase family. (1860 aa)
	v1g191257	Predicted protein. (267 aa)
	v1g214383	Predicted protein. (477 aa)
	v1g122473	Predicted protein. (94 aa)
	v1g122436	Predicted protein. (127 aa)
	v1g245600	Predicted protein. (323 aa)
	v1g119845	Predicted protein. (400 aa)
	v1g170847	Predicted protein. (1939 aa)
	v1g212030	Predicted protein. (897 aa)
	v1g116873	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (290 aa)
	v1g211357	Predicted protein. (344 aa)
	v1g114199	Predicted protein. (294 aa)
	v1g188006	Predicted protein. (183 aa)
	v1g168786	Predicted protein. (125 aa)
	v1g244209	Predicted protein. (685 aa)
	v1g42971	Predicted protein. (208 aa)
	v1g111040	Predicted protein. (1128 aa)
	v1g108790	Predicted protein. (373 aa)
	v1g243519	Predicted protein. (2067 aa)
	v1g107461	Predicted protein. (151 aa)
	v1g243341	Predicted protein. (287 aa)
	v1g207143	Predicted protein. (692 aa)
	v1g104726	Predicted protein. (66 aa)
	v1g103563	Predicted protein. (165 aa)
	v1g103789	Predicted protein. (190 aa)
	v1g102735	Predicted protein. (119 aa)
	v1g242088	Predicted protein. (394 aa)
	v1g205125	Predicted protein. (283 aa)
	v1g205033	Predicted protein. (503 aa)
	v1g99527	Predicted protein. (416 aa)
	v1g240962	Predicted protein. (178 aa)
	v1g240939	Predicted protein. (325 aa)
	v1g202420	Predicted protein. (657 aa)
	v1g201344	Predicted protein. (1498 aa)
	v1g75062	Predicted protein. (105 aa)
	v1g239406	Predicted protein. (970 aa)
	v1g239279	Predicted protein. (265 aa)
	v1g197820	Predicted protein. (974 aa)
	v1g178332	Predicted protein. (375 aa)
	v1g238416	Enhancer of polycomb-like protein. (704 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g102735	v1g239279	A7S2Z2	A7RM35	Predicted protein.	Predicted protein.	0.639
v1g107461	v1g238416	A7S7D7	A7RI01	Predicted protein.	Enhancer of polycomb-like protein.	0.694
v1g107461	v1g243341	A7S7D7	A7S799	Predicted protein.	Predicted protein.	0.654
v1g107461	v1g248421	A7S7D7	A7T0Z8	Predicted protein.	Predicted protein.	0.969
v1g111040	v1g218821	A7SAK3	A7SX15	Predicted protein.	Predicted protein.	0.723
v1g111040	v1g238416	A7SAK3	A7RI01	Predicted protein.	Enhancer of polycomb-like protein.	0.417
v1g111040	v1g238634	A7SAK3	A7RIX4	Predicted protein.	Predicted protein.	0.594
v1g111040	v1g243341	A7SAK3	A7S799	Predicted protein.	Predicted protein.	0.650
v1g111040	v1g248421	A7SAK3	A7T0Z8	Predicted protein.	Predicted protein.	0.409
v1g111040	v1g2855	A7SAK3	A7T7D0	Predicted protein.	Predicted protein.	0.815
v1g111040	v1g59717	A7SAK3	A7TCE4	Predicted protein.	Predicted protein.	0.547
v1g111040	v1g99527	A7SAK3	A7S006	Predicted protein.	Predicted protein.	0.811
v1g114199	v1g132285	A7SDK2	A7SUI2	Predicted protein.	Predicted protein.	0.599
v1g119845	v1g191257	A7SIS6	A7SM50	Predicted protein.	Predicted protein.	0.430
v1g122436	v1g178332	A7SL90	A7RIE4	Predicted protein.	Predicted protein.	0.900
v1g126375	v1g126386	A7SPT9	A7SPT8	Predicted protein.	Predicted protein; Belongs to the PI3/PI4-kinase family.	0.950
v1g126375	v1g197820	A7SPT9	A7RIZ5	Predicted protein.	Predicted protein.	0.460
v1g126375	v1g205033	A7SPT9	A7S0T5	Predicted protein.	Predicted protein.	0.932
v1g126379	v1g126386	A7SPU0	A7SPT8	Predicted protein.	Predicted protein; Belongs to the PI3/PI4-kinase family.	0.948
v1g126379	v1g197820	A7SPU0	A7RIZ5	Predicted protein.	Predicted protein.	0.460