STRINGSTRING
v1g162648 v1g162648 v1g242166 v1g242166 v1g101020 v1g101020 v1g101531 v1g101531 v1g114561 v1g114561 v1g190793 v1g190793 v1g192736 v1g192736 v1g222121 v1g222121 v1g92832 v1g92832
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
v1g162648Predicted protein; Belongs to the adaptor complexes medium subunit family. (423 aa)
v1g242166Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (183 aa)
v1g101020Predicted protein. (198 aa)
v1g101531AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
v1g114561AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
v1g190793Predicted protein; Belongs to the adaptor complexes medium subunit family. (421 aa)
v1g192736Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (516 aa)
v1g222121Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (381 aa)
v1g92832AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (150 aa)
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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