(45 nodes) Integration of energy metabolism network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g70130	Predicted protein. (719 aa)
	v1g41088	Predicted protein. (372 aa)
	v1g248767	Predicted protein. (771 aa)
	v1g6637	Predicted protein. (72 aa)
	v1g69200	Predicted protein. (79 aa)
	v1g221595	Predicted protein. (273 aa)
	v1g143444	Predicted protein. (114 aa)
	v1g195566	Predicted protein. (708 aa)
	v1g60533	Predicted protein. (733 aa)
	v1g219177	Predicted protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (233 aa)
	v1g217329	Predicted protein. (254 aa)
	v1g131282	Predicted protein. (152 aa)
	v1g131315	Predicted protein. (156 aa)
	v1g216887	Predicted protein. (75 aa)
	v1g171367	Predicted protein. (304 aa)
	v1g212694	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (69 aa)
	v1g116759	Predicted protein. (968 aa)
	v1g244849	Predicted protein. (353 aa)
	v1g244707	Predicted protein. (2623 aa)
	v1g55658	Predicted protein. (174 aa)
	v1g169332	Predicted protein. (388 aa)
	v1g26800	Predicted protein. (197 aa)
	v1g243883	Predicted protein. (1009 aa)
	v1g243339	Predicted protein. (360 aa)
	v1g106483	Predicted protein. (736 aa)
	v1g105798	Predicted protein. (340 aa)
	v1g234931	Predicted protein. (373 aa)
	v1g242737	Predicted protein. (353 aa)
	v1g205425	Predicted protein. (491 aa)
	v1g20079	Predicted protein. (1093 aa)
	v1g162417	Predicted protein. (624 aa)
	v1g200761	Predicted protein. (212 aa)
	v1g177058	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (323 aa)
	v1g239841	Predicted protein. (1064 aa)
	v1g87200	Predicted protein. (624 aa)
	v1g198330	Predicted protein. (148 aa)
	v1g198328	Predicted protein. (573 aa)
	v1g83866	Predicted protein. (375 aa)
	v1g238752	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (64 aa)
	v1g82259	Predicted protein. (166 aa)
	v1g80319	Predicted protein. (390 aa)
	v1g79931	Predicted protein. (158 aa)
	v1g156659	Predicted protein. (159 aa)
	v1g152522	Predicted protein. (158 aa)
	v1g45212	Predicted protein. (163 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g105798	v1g205425	A7S5Z1	A7S1P1	Predicted protein.	Predicted protein.	0.592
v1g105798	v1g212694	A7S5Z1	A7SI97	Predicted protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.939
v1g105798	v1g216887	A7S5Z1	A7SSR6	Predicted protein.	Predicted protein.	0.958
v1g105798	v1g238752	A7S5Z1	A7RJI5	Predicted protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.939
v1g105798	v1g242737	A7S5Z1	A7S470	Predicted protein.	Predicted protein.	0.987
v1g105798	v1g244849	A7S5Z1	A7SF63	Predicted protein.	Predicted protein.	0.552
v1g106483	v1g20079	A7S6I9	A7RXZ3	Predicted protein.	Predicted protein.	0.488
v1g106483	v1g6637	A7S6I9	A7T5Y8	Predicted protein.	Predicted protein.	0.488
v1g116759	v1g205425	A7SFW1	A7S1P1	Predicted protein.	Predicted protein.	0.655
v1g131282	v1g205425	A7STN2	A7S1P1	Predicted protein.	Predicted protein.	0.752
v1g131315	v1g205425	A7STN1	A7S1P1	Predicted protein.	Predicted protein.	0.752
v1g143444	v1g205425	A7T2S4	A7S1P1	Predicted protein.	Predicted protein.	0.651
v1g143444	v1g248767	A7T2S4	A7T616	Predicted protein.	Predicted protein.	0.948
v1g152522	v1g177058	A7TAL5	A7RF51	Predicted protein.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.938
v1g156659	v1g177058	A8DVQ4	A7RF51	Predicted protein.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.938
v1g162417	v1g177058	A7RT86	A7RF51	Predicted protein.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.993
v1g162417	v1g87200	A7RT86	A7RMW9	Predicted protein.	Predicted protein.	0.901
v1g169332	v1g205425	A7SDH8	A7S1P1	Predicted protein.	Predicted protein.	0.752
v1g169332	v1g234931	A7SDH8	A7S513	Predicted protein.	Predicted protein.	0.563
v1g169332	v1g80319	A7SDH8	A7RGJ3	Predicted protein.	Predicted protein.	0.562