(33 nodes) Calnexin/calreticulin cycle network (Nematostella vectensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	v1g245257	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (860 aa)
	v1g189518	Predicted protein. (217 aa)
	v1g115386	Predicted protein. (177 aa)
	v1g207988	Predicted protein. (376 aa)
	v1g243351	Predicted protein. (282 aa)
	v1g242772	Predicted protein. (320 aa)
	v1g242637	Predicted protein. (237 aa)
	v1g203909	Predicted protein. (328 aa)
	v1g162231	Predicted protein. (147 aa)
	v1g199864	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (494 aa)
	v1g160496	Predicted protein. (903 aa)
	v1g61368	Predicted protein. (366 aa)
	v1g238696	Predicted protein; Belongs to the glycosyl hydrolase 31 family. (917 aa)
	v1g159364	Predicted protein. (157 aa)
	v1g158469	Predicted protein. (617 aa)
	v1g80092	Predicted protein. (433 aa)
	v1g135970	Predicted protein. (196 aa)
	v1g135928	Predicted protein. (283 aa)
	v1g218952	Predicted protein. (304 aa)
	v1g13029	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (342 aa)
	v1g142868	Predicted protein. (159 aa)
	v1g986	Predicted protein. (407 aa)
	v1g4148	Predicted protein. (167 aa)
	v1g145228	Predicted protein. (64 aa)
	v1g8771	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (90 aa)
	v1g217964	Predicted protein. (229 aa)
	v1g217764	Predicted protein. (533 aa)
	v1g135950	Predicted protein. (679 aa)
	v1g16611	Predicted protein. (170 aa)
	v1g247222	Predicted protein. (417 aa)
	v1g170950	Predicted protein. (521 aa)
	v1g25775	Predicted protein. (154 aa)
	v1g222092	Predicted protein. (251 aa)

Your Current Organism:

Nematostella vectensis

NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
v1g13029	v1g238696	A7T0F0	A7RJ81	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Predicted protein; Belongs to the glycosyl hydrolase 31 family.	0.941
v1g13029	v1g61368	A7T0F0	A7RK57	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Predicted protein.	0.435
v1g13029	v1g80092	A7T0F0	A7RFV3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Predicted protein.	0.576
v1g13029	v1g8771	A7T0F0	A7TCY5	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.900
v1g135928	v1g135950	A7SWY1	A7SWX7	Predicted protein.	Predicted protein.	0.934
v1g135928	v1g142868	A7SWY1	A7T295	Predicted protein.	Predicted protein.	0.950
v1g135928	v1g16611	A7SWY1	A7SWX9	Predicted protein.	Predicted protein.	0.947
v1g135928	v1g238696	A7SWY1	A7RJ81	Predicted protein.	Predicted protein; Belongs to the glycosyl hydrolase 31 family.	0.470
v1g135928	v1g80092	A7SWY1	A7RFV3	Predicted protein.	Predicted protein.	0.418
v1g135928	v1g986	A7SWY1	A7T296	Predicted protein.	Predicted protein.	0.935
v1g135950	v1g135928	A7SWX7	A7SWY1	Predicted protein.	Predicted protein.	0.934
v1g135950	v1g135970	A7SWX7	A7SWY0	Predicted protein.	Predicted protein.	0.934
v1g135950	v1g142868	A7SWX7	A7T295	Predicted protein.	Predicted protein.	0.941
v1g135950	v1g16611	A7SWX7	A7SWX9	Predicted protein.	Predicted protein.	0.942
v1g135950	v1g238696	A7SWX7	A7RJ81	Predicted protein.	Predicted protein; Belongs to the glycosyl hydrolase 31 family.	0.470
v1g135950	v1g4148	A7SWX7	A7T308	Predicted protein.	Predicted protein.	0.928
v1g135950	v1g80092	A7SWX7	A7RFV3	Predicted protein.	Predicted protein.	0.418
v1g135970	v1g135950	A7SWY0	A7SWX7	Predicted protein.	Predicted protein.	0.934
v1g135970	v1g142868	A7SWY0	A7T295	Predicted protein.	Predicted protein.	0.950
v1g135970	v1g16611	A7SWY0	A7SWX9	Predicted protein.	Predicted protein.	0.947