STRINGSTRING
v1g118965 v1g118965 v1g190101 v1g190101 v1g119986 v1g119986 v1g120723 v1g120723 v1g213275 v1g213275 v1g225285 v1g225285 v1g171933 v1g171933 v1g246161 v1g246161 v1g123477 v1g123477 v1g246363 v1g246363 v1g230610 v1g230610 v1g246552 v1g246552 v1g127386 v1g127386 v1g127899 v1g127899 v1g132358 v1g132358 CBFbeta CBFbeta v1g247948 v1g247948 v1g82479 v1g82479 v1g82906 v1g82906 v1g178640 v1g178640 v1g106863 v1g106863 v1g83818 v1g83818 v1g198116 v1g198116 v1g83997 v1g83997 v1g198108 v1g198108 v1g198111 v1g198111 v1g67237 v1g67237 v1g228495 v1g228495 v1g200353 v1g200353 v1g200571 v1g200571 v1g180812 v1g180812 v1g92302 v1g92302 v1g95962 v1g95962 v1g203375 v1g203375 v1g204099 v1g204099 v1g165261 v1g165261 v1g229400 v1g229400 v1g105193 v1g105193 v1g166819 v1g166819 v1g106064 v1g106064 v1g243247 v1g243247 v1g207796 v1g207796 v1g229643 v1g229643 v1g237030 v1g237030 v1g110858 v1g110858 v1g244053 v1g244053 v1g115076 v1g115076 v1g237164 v1g237164 v1g117224 v1g117224 v1g58200 v1g58200 v1g189883 v1g189883 v1g175530 v1g175530 v1g219654 v1g219654 v1g175850 v1g175850 v1g141884 v1g141884 v1g223075 v1g223075 v1g227726 v1g227726 v1g148786 v1g148786 v1g150332 v1g150332 v1g151047 v1g151047 v1g70504 v1g70504 v1g152452 v1g152452 v1g227759 v1g227759 v1g224574 v1g224574 v1g152686 v1g152686 v1g153605 v1g153605 v1g59503 v1g59503 v1g9075 v1g9075 v1g155025 v1g155025 v1g155473 v1g155473 v1g224990 v1g224990 v1g157309 v1g157309
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
v1g118965Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (222 aa)
v1g190101Predicted protein. (274 aa)
v1g119986Predicted protein. (249 aa)
v1g120723Predicted protein. (245 aa)
v1g213275Predicted protein. (116 aa)
v1g225285Histone H2B; Belongs to the histone H2B family. (67 aa)
v1g171933Predicted protein. (67 aa)
v1g246161Predicted protein. (1308 aa)
v1g123477Predicted protein. (431 aa)
v1g246363Predicted protein; Belongs to the protein kinase superfamily. (370 aa)
v1g230610Histone H2B; Belongs to the histone H2B family. (118 aa)
v1g246552Predicted protein. (98 aa)
v1g127386Predicted protein. (108 aa)
v1g127899Predicted protein. (126 aa)
v1g132358Predicted protein. (60 aa)
CBFbetaCore-binding factor subunit beta. (176 aa)
v1g247948DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (129 aa)
v1g82479Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (177 aa)
v1g82906Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (65 aa)
v1g178640Predicted protein. (727 aa)
v1g106863Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
v1g83818Histone H2B; Belongs to the histone H2B family. (123 aa)
v1g198116Histone H2B; Belongs to the histone H2B family. (67 aa)
v1g83997Histone H2B; Belongs to the histone H2B family. (115 aa)
v1g198108Histone H2B; Belongs to the histone H2B family. (123 aa)
v1g198111Histone H2B; Belongs to the histone H2B family. (123 aa)
v1g67237Predicted protein. (101 aa)
v1g228495Histone H2B; Belongs to the histone H2B family. (123 aa)
v1g200353Histone H2B; Belongs to the histone H2B family. (123 aa)
v1g200571Histone H2B; Belongs to the histone H2B family. (118 aa)
v1g180812Histone H2A; Belongs to the histone H2A family. (127 aa)
v1g92302Predicted protein. (207 aa)
v1g95962Predicted protein. (135 aa)
v1g203375Predicted protein. (194 aa)
v1g204099Histone H2B; Belongs to the histone H2B family. (157 aa)
v1g165261Predicted protein. (286 aa)
v1g229400Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (213 aa)
v1g105193Predicted protein. (741 aa)
v1g166819Predicted protein. (138 aa)
v1g106064Predicted protein. (1451 aa)
v1g243247Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1152 aa)
v1g207796Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (219 aa)
v1g229643DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1929 aa)
v1g237030DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
v1g110858Predicted protein. (248 aa)
v1g244053Predicted protein. (172 aa)
v1g115076Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
v1g237164Predicted protein; Belongs to the histone H2B family. (115 aa)
v1g117224Predicted protein. (117 aa)
v1g58200Histone H2B; Belongs to the histone H2B family. (119 aa)
v1g189883DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
v1g175530Predicted protein. (71 aa)
v1g219654Histone H2B; Belongs to the histone H2B family. (122 aa)
v1g175850Histone H2B; Belongs to the histone H2B family. (122 aa)
v1g141884Histone H2B; Belongs to the histone H2B family. (64 aa)
v1g223075Predicted protein. (197 aa)
v1g227726Predicted protein; Belongs to the histone H2B family. (122 aa)
v1g148786Predicted protein. (142 aa)
v1g150332Predicted protein. (67 aa)
v1g151047Predicted protein; Belongs to the RNA polymerase beta chain family. (382 aa)
v1g70504DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (462 aa)
v1g152452Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (58 aa)
v1g227759Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
v1g224574Predicted protein; Belongs to the histone H2B family. (235 aa)
v1g152686Predicted protein; Belongs to the histone H2B family. (94 aa)
v1g153605Histone H2B; Belongs to the histone H2B family. (83 aa)
v1g59503Predicted protein; Belongs to the histone H2B family. (103 aa)
v1g9075Predicted protein; Belongs to the histone H2B family. (63 aa)
v1g155025Predicted protein; Belongs to the histone H2B family. (114 aa)
v1g155473Predicted protein; Belongs to the histone H2B family. (99 aa)
v1g224990Predicted protein; Belongs to the histone H2B family. (100 aa)
v1g157309Predicted protein; Belongs to the histone H2B family. (104 aa)
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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