STRINGSTRING
v1g238228 v1g238228 v1g82479 v1g82479 v1g178700 v1g178700 v1g67237 v1g67237 v1g180316 v1g180316 v1g162513 v1g162513 v1g240727 v1g240727 v1g93714 v1g93714 v1g203375 v1g203375 v1g241252 v1g241252 v1g164541 v1g164541 v1g166645 v1g166645 v1g167568 v1g167568 v1g244165 v1g244165 v1g115691 v1g115691 v1g118178 v1g118178 v1g212490 v1g212490 v1g246040 v1g246040 v1g130552 v1g130552 v1g130839 v1g130839 v1g10142 v1g10142 v1g133899 v1g133899 v1g138459 v1g138459 v1g175862 v1g175862 v1g139976 v1g139976
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
v1g238228Predicted protein. (542 aa)
v1g82479Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (177 aa)
v1g178700Predicted protein. (931 aa)
v1g67237Predicted protein. (101 aa)
v1g180316Predicted protein. (735 aa)
v1g162513Predicted protein. (662 aa)
v1g240727Predicted protein. (255 aa)
v1g93714Predicted protein. (116 aa)
v1g203375Predicted protein. (194 aa)
v1g241252Predicted protein. (306 aa)
v1g164541Predicted protein. (511 aa)
v1g166645Predicted protein. (124 aa)
v1g167568Predicted protein; Belongs to the cyclin family. (306 aa)
v1g244165General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (471 aa)
v1g115691Predicted protein. (421 aa)
v1g118178Predicted protein. (310 aa)
v1g212490Predicted protein. (969 aa)
v1g246040Predicted protein. (255 aa)
v1g130552Predicted protein; Belongs to the protein kinase superfamily. (337 aa)
v1g130839Predicted protein. (599 aa)
v1g10142Predicted protein. (997 aa)
v1g133899Predicted protein. (130 aa)
v1g138459Predicted protein. (108 aa)
v1g175862Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (288 aa)
v1g139976Predicted protein. (106 aa)
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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