(18 nodes) Exosome (RNase complex), and Polyadenylation-dependent snoRNA 3-end processing network (Candida haemulonis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

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Others

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co-expression

protein homology

Your Input:
	CXQ85_001562	EXOSC1 domain-containing protein. (291 aa)
	CXQ85_001308	RNase_PH domain-containing protein. (352 aa)
	CXQ85_003250	Importin N-terminal domain-containing protein. (1000 aa)
	CXQ85_003456	Uncharacterized protein. (265 aa)
	CXQ85_001223	Uncharacterized protein. (132 aa)
	CXQ85_002186	Uncharacterized protein. (238 aa)
	CXQ85_000082	Uncharacterized protein. (365 aa)
	CXQ85_004465	RNase_PH domain-containing protein. (286 aa)
	CXQ85_004521	Importin N-terminal domain-containing protein. (1032 aa)
	CXQ85_000423	RNase_PH domain-containing protein. (289 aa)
	CXQ85_000875	RNB domain-containing protein; Belongs to the RNR ribonuclease family. (1121 aa)
	CXQ85_004625	Uncharacterized protein; Belongs to the RNR ribonuclease family. (976 aa)
	CXQ85_004256	RNB domain-containing protein. (1211 aa)
	CXQ85_005297	Uncharacterized protein. (243 aa)
	CXQ85_004771	RNase_PH domain-containing protein. (275 aa)
	CXQ85_004781	3'-5' exonuclease domain-containing protein. (1318 aa)
	CXQ85_004859	ATP-dependent RNA helicase DOB1. (1051 aa)
	CXQ85_003950	Uncharacterized protein. (346 aa)

Your Current Organism:

Candida haemulonis

NCBI taxonomy Id: 45357
Other names: ATCC 22991, CBS 5149, Candida haemulonii type II, DBVPG 6958, IFO 10001, IGC 3025, JCM 3762, NRRL Y-6693, Torulopsis haemuloni, [. haemulonis, [Candida] haemulonis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CXQ85_000082	CXQ85_000423	A0A2V1ASB9	A0A2V1AUE7	Uncharacterized protein.	RNase_PH domain-containing protein.	0.946
CXQ85_000082	CXQ85_000875	A0A2V1ASB9	A0A2V1AUU5	Uncharacterized protein.	RNB domain-containing protein; Belongs to the RNR ribonuclease family.	0.754
CXQ85_000082	CXQ85_001308	A0A2V1ASB9	A0A2V1AMU9	Uncharacterized protein.	RNase_PH domain-containing protein.	0.946
CXQ85_000082	CXQ85_001562	A0A2V1ASB9	A0A2V1ALT3	Uncharacterized protein.	EXOSC1 domain-containing protein.	0.945
CXQ85_000082	CXQ85_002186	A0A2V1ASB9	A0A2V1ARC4	Uncharacterized protein.	Uncharacterized protein.	0.941
CXQ85_000082	CXQ85_003250	A0A2V1ASB9	A0A2V1ANH5	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.658
CXQ85_000082	CXQ85_003456	A0A2V1ASB9	A0A2V1AP12	Uncharacterized protein.	Uncharacterized protein.	0.939
CXQ85_000082	CXQ85_003950	A0A2V1ASB9	A0A2V1B139	Uncharacterized protein.	Uncharacterized protein.	0.936
CXQ85_000082	CXQ85_004256	A0A2V1ASB9	A0A2V1AV44	Uncharacterized protein.	RNB domain-containing protein.	0.754
CXQ85_000082	CXQ85_004465	A0A2V1ASB9	A0A2V1ASX9	Uncharacterized protein.	RNase_PH domain-containing protein.	0.893
CXQ85_000082	CXQ85_004521	A0A2V1ASB9	A0A2V1AT73	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.658
CXQ85_000082	CXQ85_004625	A0A2V1ASB9	A0A2V1AV16	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.754
CXQ85_000082	CXQ85_004771	A0A2V1ASB9	A0A2V1AWC4	Uncharacterized protein.	RNase_PH domain-containing protein.	0.942
CXQ85_000082	CXQ85_004781	A0A2V1ASB9	A0A2V1AWC8	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.756
CXQ85_000082	CXQ85_004859	A0A2V1ASB9	A0A2V1AWM3	Uncharacterized protein.	ATP-dependent RNA helicase DOB1.	0.693
CXQ85_000423	CXQ85_000082	A0A2V1AUE7	A0A2V1ASB9	RNase_PH domain-containing protein.	Uncharacterized protein.	0.946
CXQ85_000423	CXQ85_000875	A0A2V1AUE7	A0A2V1AUU5	RNase_PH domain-containing protein.	RNB domain-containing protein; Belongs to the RNR ribonuclease family.	0.930
CXQ85_000423	CXQ85_001223	A0A2V1AUE7	A0A2V1APP4	RNase_PH domain-containing protein.	Uncharacterized protein.	0.965
CXQ85_000423	CXQ85_001308	A0A2V1AUE7	A0A2V1AMU9	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
CXQ85_000423	CXQ85_001562	A0A2V1AUE7	A0A2V1ALT3	RNase_PH domain-containing protein.	EXOSC1 domain-containing protein.	0.999

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