(47 nodes) Prp19 complex, and mRNA Splicing - Major Pathway network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FHZ3	Uncharacterized protein. (482 aa)
	A0A0E0FIE1	Uncharacterized protein. (561 aa)
	A0A0E0FJI1	Uncharacterized protein. (170 aa)
	A0A0E0FM02	Purple acid phosphatase. (1148 aa)
	A0A0E0FNK9	PPIase cyclophilin-type domain-containing protein. (499 aa)
	A0A0E0FNR8	Uncharacterized protein. (291 aa)
	A0A0E0FRE5	Uncharacterized protein. (658 aa)
	A0A0E0G594	Uncharacterized protein. (326 aa)
	A0A0E0G5M7	WD_REPEATS_REGION domain-containing protein. (451 aa)
	A0A0E0G8A2	COX assembly mitochondrial protein. (71 aa)
	A0A0E0G9J6	Uncharacterized protein. (311 aa)
	A0A0E0GD89	SKIP_SNW domain-containing protein. (607 aa)
	A0A0E0GEI7	Poly [ADP-ribose] polymerase. (463 aa)
	A0A0E0GKV0	Uncharacterized protein. (404 aa)
	A0A0E0GNH0	Proteasome endopeptidase complex. (1822 aa)
	A0A0E0GQA5	RRM domain-containing protein. (171 aa)
	A0A0E0GSD8	SFM domain-containing protein. (446 aa)
	A0A0E0GTX2	DUF1618 domain-containing protein. (474 aa)
	A0A0E0GTY5	DUF1618 domain-containing protein. (331 aa)
	A0A0E0GVV6	Uncharacterized protein. (312 aa)
	A0A0E0H7A4	Poly [ADP-ribose] polymerase. (975 aa)
	A0A0E0HDV6	Uncharacterized protein. (1070 aa)
	A0A0E0HF88	Uncharacterized protein. (922 aa)
	A0A0E0HF92	Uncharacterized protein. (714 aa)
	A0A0E0HGB4	Uncharacterized protein. (368 aa)
	A0A0E0HHP0	FHA domain-containing protein. (737 aa)
	A0A0E0HK24	Uncharacterized protein. (530 aa)
	A0A0E0HMR0	SKIP_SNW domain-containing protein. (492 aa)
	A0A0E0HN75	Uncharacterized protein. (641 aa)
	A0A0E0HNG8	Poly [ADP-ribose] polymerase. (825 aa)
	A0A0E0HV96	Uncharacterized protein. (322 aa)
	A0A0E0HV98	Uncharacterized protein. (340 aa)
	A0A0E0HZ41	Uncharacterized protein. (486 aa)
	A0A0E0I1T6	Uncharacterized protein. (1287 aa)
	A0A0E0I2K9	SFM domain-containing protein. (438 aa)
	A0A0E0I4U8	Uncharacterized protein. (931 aa)
	A0A0E0I6S8	Slu7 domain-containing protein. (536 aa)
	A0A0E0I7T6	Uncharacterized protein. (569 aa)
	A0A0E0ICA2	Uncharacterized protein. (679 aa)
	A0A0E0IDY1	Cir_N domain-containing protein. (510 aa)
	A0A0E0IE29	Uncharacterized protein. (723 aa)
	A0A0E0IQN8	Uncharacterized protein. (711 aa)
	A0A0E0IYT1	Cwf21 domain-containing protein. (192 aa)
	A0A0E0IZ71	Uncharacterized protein. (219 aa)
	A0A0E0IZ80	Uncharacterized protein. (216 aa)
	A0A0E0J6R3	Uncharacterized protein. (145 aa)
	A0A0E0J9M8	MI domain-containing protein. (755 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FHZ3	A0A0E0FIE1	Uncharacterized protein.	Uncharacterized protein.	0.670
A0A0E0FHZ3	A0A0E0FJI1	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A0E0FHZ3	A0A0E0FM02	Uncharacterized protein.	Purple acid phosphatase.	0.858
A0A0E0FHZ3	A0A0E0FNK9	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.949
A0A0E0FHZ3	A0A0E0FNR8	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A0E0FHZ3	A0A0E0FRE5	Uncharacterized protein.	Uncharacterized protein.	0.911
A0A0E0FHZ3	A0A0E0G594	Uncharacterized protein.	Uncharacterized protein.	0.923
A0A0E0FHZ3	A0A0E0G5M7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.920
A0A0E0FHZ3	A0A0E0G8A2	Uncharacterized protein.	COX assembly mitochondrial protein.	0.795
A0A0E0FHZ3	A0A0E0G9J6	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A0E0FHZ3	A0A0E0GD89	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.973
A0A0E0FHZ3	A0A0E0GEI7	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.849
A0A0E0FHZ3	A0A0E0GKV0	Uncharacterized protein.	Uncharacterized protein.	0.815
A0A0E0FHZ3	A0A0E0GNH0	Uncharacterized protein.	Proteasome endopeptidase complex.	0.963
A0A0E0FHZ3	A0A0E0GQA5	Uncharacterized protein.	RRM domain-containing protein.	0.849
A0A0E0FHZ3	A0A0E0GSD8	Uncharacterized protein.	SFM domain-containing protein.	0.729
A0A0E0FHZ3	A0A0E0GTX2	Uncharacterized protein.	DUF1618 domain-containing protein.	0.911
A0A0E0FHZ3	A0A0E0GTY5	Uncharacterized protein.	DUF1618 domain-containing protein.	0.911
A0A0E0FHZ3	A0A0E0GVV6	Uncharacterized protein.	Uncharacterized protein.	0.922
A0A0E0FHZ3	A0A0E0H7A4	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.849