(5 nodes) Nuclear cap binding complex, and SERRATE/Ars2 network (Oryza sativa f. spontanea)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FN69	RNA_GG_bind domain-containing protein. (278 aa)
	A0A0E0G9T4	RRM domain-containing protein. (704 aa)
	A0A0E0GMC1	MIF4G domain-containing protein. (914 aa)
	A0A0E0HES4	C2H2-type domain-containing protein. (666 aa)
	A0A0E0IEK6	C2H2-type domain-containing protein. (656 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FN69	A0A0E0G9T4	RNA_GG_bind domain-containing protein.	RRM domain-containing protein.	0.984
A0A0E0FN69	A0A0E0GMC1	RNA_GG_bind domain-containing protein.	MIF4G domain-containing protein.	0.958
A0A0E0FN69	A0A0E0HES4	RNA_GG_bind domain-containing protein.	C2H2-type domain-containing protein.	0.843
A0A0E0FN69	A0A0E0IEK6	RNA_GG_bind domain-containing protein.	C2H2-type domain-containing protein.	0.843
A0A0E0G9T4	A0A0E0FN69	RRM domain-containing protein.	RNA_GG_bind domain-containing protein.	0.984
A0A0E0G9T4	A0A0E0GMC1	RRM domain-containing protein.	MIF4G domain-containing protein.	0.999
A0A0E0G9T4	A0A0E0HES4	RRM domain-containing protein.	C2H2-type domain-containing protein.	0.972
A0A0E0G9T4	A0A0E0IEK6	RRM domain-containing protein.	C2H2-type domain-containing protein.	0.972
A0A0E0GMC1	A0A0E0FN69	MIF4G domain-containing protein.	RNA_GG_bind domain-containing protein.	0.958
A0A0E0GMC1	A0A0E0G9T4	MIF4G domain-containing protein.	RRM domain-containing protein.	0.999
A0A0E0GMC1	A0A0E0HES4	MIF4G domain-containing protein.	C2H2-type domain-containing protein.	0.987
A0A0E0GMC1	A0A0E0IEK6	MIF4G domain-containing protein.	C2H2-type domain-containing protein.	0.987
A0A0E0HES4	A0A0E0FN69	C2H2-type domain-containing protein.	RNA_GG_bind domain-containing protein.	0.843
A0A0E0HES4	A0A0E0G9T4	C2H2-type domain-containing protein.	RRM domain-containing protein.	0.972
A0A0E0HES4	A0A0E0GMC1	C2H2-type domain-containing protein.	MIF4G domain-containing protein.	0.987
A0A0E0IEK6	A0A0E0FN69	C2H2-type domain-containing protein.	RNA_GG_bind domain-containing protein.	0.843
A0A0E0IEK6	A0A0E0G9T4	C2H2-type domain-containing protein.	RRM domain-containing protein.	0.972
A0A0E0IEK6	A0A0E0GMC1	C2H2-type domain-containing protein.	MIF4G domain-containing protein.	0.987