(19 nodes) Mixed, incl. Sensing of DNA Double Strand Breaks, and DNA helicase, ATP-dependent, RecQ type network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FF11	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2702 aa)
	A0A0E0FFW4	FHA domain-containing protein. (548 aa)
	A0A0E0FPY7	Uncharacterized protein. (377 aa)
	A0A0E0FTX0	Uncharacterized protein. (793 aa)
	A0A0E0G8D3	Uncharacterized protein. (442 aa)
	A0A0E0GDN3	Uncharacterized protein. (643 aa)
	A0A0E0GKL0	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (682 aa)
	A0A0E0H115	Uncharacterized protein. (1043 aa)
	A0A0E0H2C3	Uncharacterized protein. (931 aa)
	A0A0E0H340	Uncharacterized protein. (629 aa)
	A0A0E0H593	Uncharacterized protein. (1248 aa)
	A0A0E0HFN6	Uncharacterized protein. (2172 aa)
	A0A0E0HGU2	Uncharacterized protein. (986 aa)
	A0A0E0HVP4	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2688 aa)
	A0A0E0I653	Uncharacterized protein. (477 aa)
	A0A0E0I7S9	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (589 aa)
	A0A0E0IBS9	BRCT domain-containing protein. (521 aa)
	A0A0E0J6L7	Uncharacterized protein; Belongs to the RecA family. (424 aa)
	A0A0E0JAL5	Uncharacterized protein; Belongs to the RecA family. (294 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FF11	A0A0E0FFW4	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FHA domain-containing protein.	0.991
A0A0E0FF11	A0A0E0FPY7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.955
A0A0E0FF11	A0A0E0FTX0	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.942
A0A0E0FF11	A0A0E0G8D3	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.854
A0A0E0FF11	A0A0E0GDN3	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.868
A0A0E0FF11	A0A0E0GKL0	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.962
A0A0E0FF11	A0A0E0H115	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.868
A0A0E0FF11	A0A0E0H2C3	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.868
A0A0E0FF11	A0A0E0H340	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.912
A0A0E0FF11	A0A0E0H593	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.944
A0A0E0FF11	A0A0E0HGU2	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.926
A0A0E0FF11	A0A0E0HVP4	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.993
A0A0E0FF11	A0A0E0I653	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.955
A0A0E0FF11	A0A0E0I7S9	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.962
A0A0E0FF11	A0A0E0IBS9	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	BRCT domain-containing protein.	0.943
A0A0E0FF11	A0A0E0J6L7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the RecA family.	0.809
A0A0E0FF11	A0A0E0JAL5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the RecA family.	0.776
A0A0E0FFW4	A0A0E0FF11	FHA domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.991
A0A0E0FFW4	A0A0E0FPY7	FHA domain-containing protein.	Uncharacterized protein.	0.992
A0A0E0FFW4	A0A0E0FTX0	FHA domain-containing protein.	Uncharacterized protein.	0.867