(13 nodes) LDL clearance, and NECAP, PHear domain network (Oryza sativa f. spontanea)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FPJ1	DUF1681 domain-containing protein. (321 aa)
	A0A0E0G607	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (438 aa)
	A0A0E0GCP0	Rhodanese domain-containing protein. (387 aa)
	A0A0E0GFX7	AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. (1006 aa)
	A0A0E0GGA0	Uncharacterized protein. (1068 aa)
	A0A0E0GK55	Uncharacterized protein. (117 aa)
	A0A0E0GMI5	Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (910 aa)
	A0A0E0I935	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (640 aa)
	A0A0E0IBA1	Uncharacterized protein. (436 aa)
	A0A0E0IHB8	Protein kinase domain-containing protein. (703 aa)
	A0A0E0ITY4	DUF1681 domain-containing protein. (287 aa)
	A0A0E0J5T2	Clathrin-link domain-containing protein. (705 aa)
	A0A0E0J7X8	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (151 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FPJ1	A0A0E0G607	DUF1681 domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.944
A0A0E0FPJ1	A0A0E0GCP0	DUF1681 domain-containing protein.	Rhodanese domain-containing protein.	0.944
A0A0E0FPJ1	A0A0E0GFX7	DUF1681 domain-containing protein.	AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.	0.949
A0A0E0FPJ1	A0A0E0GGA0	DUF1681 domain-containing protein.	Uncharacterized protein.	0.782
A0A0E0FPJ1	A0A0E0GK55	DUF1681 domain-containing protein.	Uncharacterized protein.	0.878
A0A0E0FPJ1	A0A0E0GMI5	DUF1681 domain-containing protein.	Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	0.878
A0A0E0FPJ1	A0A0E0I935	DUF1681 domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.841
A0A0E0FPJ1	A0A0E0IBA1	DUF1681 domain-containing protein.	Uncharacterized protein.	0.860
A0A0E0FPJ1	A0A0E0IHB8	DUF1681 domain-containing protein.	Protein kinase domain-containing protein.	0.744
A0A0E0FPJ1	A0A0E0J5T2	DUF1681 domain-containing protein.	Clathrin-link domain-containing protein.	0.751
A0A0E0FPJ1	A0A0E0J7X8	DUF1681 domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.860
A0A0E0G607	A0A0E0FPJ1	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	DUF1681 domain-containing protein.	0.944
A0A0E0G607	A0A0E0GFX7	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.	0.998
A0A0E0G607	A0A0E0GGA0	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.850
A0A0E0G607	A0A0E0GK55	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.968
A0A0E0G607	A0A0E0GMI5	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	0.978
A0A0E0G607	A0A0E0I935	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.952
A0A0E0G607	A0A0E0IBA1	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.974
A0A0E0G607	A0A0E0IHB8	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Protein kinase domain-containing protein.	0.878
A0A0E0G607	A0A0E0ITY4	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	DUF1681 domain-containing protein.	0.944